C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junctophilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342272 JPH2-002 ENSG00000149596 9606 - 20:44176817-44187093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaENST00000342272
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000342272 0.096±0.00 0.205±0.00 1.856±0.00 0.442±0.00 4.377±0.00 0.332±0.00 5.439±0.00 0.114±0.00 1.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044Q CIL_00044Q_0001 CGP 20:43914864-44187578
CIL_00044N CIL_00044N_0001 CGP 20:44111695-44210791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IDA phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005886 IEA plasma membrane
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0014701 TAS junctional sarcoplasmic reticulum membrane
GO:0015278 IDA calcium-release channel activity
GO:0016021 IEA integral component of membrane
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0055074 IDA calcium ion homeostasis
GO:0060314 TAS regulation of ryanodine-sensitive calcium-release channel activity
GO:0060316 IDA positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0060402 TAS calcium ion transport into cytosol
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0070300 IDA phosphatidic acid binding
GO:0070588 IDA calcium ion transmembrane transport
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109425 Jph2-201 protein_coding Mus_musculus 0 534
ENSMUST00000017961 Jph2-001 protein_coding Mus_musculus 0 534

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