C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002BQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091092-ENSDARG00000001857 CGP 7955 21:41576791-41652651
GeneTranscriptPositionBiotype
ENSDARG00000004754 (hspa4a)
heat shock protein 4a 		ENSDART00000021037 (hspa4a-201) 41543121-41577027 protein_coding
ENSDART00000148630 (hspa4a-001) 41556802-41577027 protein_coding
ENSDARG00000091092 (zcchc10)
zinc finger, CCHC domain containing 10 		ENSDART00000115192 (zcchc10-201) 41578284-41583014 protein_coding
ENSDART00000121725 (zcchc10-001) 41578284-41583017 protein_coding
ENSDART00000151249 (zcchc10-003) 41579496-41582071 retained_intron
ENSDART00000151362 (zcchc10-002) 41576791-41579544 protein_coding
CIL_0002BQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018239-ENSMUSG00000049470 CGP 10090 11:53324679-53421830
GeneTranscriptPositionBiotype
ENSMUSG00000018239 (Zcchc10)
zinc finger, CCHC domain containing 10 		ENSMUST00000018383 (Zcchc10-001) 53324679-53333301 protein_coding
ENSMUST00000141585 (Zcchc10-002) 53327400-53332479 nonsense_mediated_decay
ENSMUSG00000049470 (Aff4)
AF4/FMR2 family, member 4 		ENSMUST00000060945 (Aff4-001) 53350833-53421830 protein_coding
ENSMUST00000129019 (Aff4-002) 53410694-53415833 retained_intron
ENSMUST00000130152 (Aff4-006) 53372974-53399625 processed_transcript
ENSMUST00000136470 (Aff4-004) 53372580-53375710 retained_intron
ENSMUST00000139054 (Aff4-005) 53368630-53375938 retained_intron
ENSMUST00000152616 (Aff4-007) 53372966-53398399 protein_coding
ENSMUST00000153821 (Aff4-008) 53368073-53372520 protein_coding
ENSMUST00000154499 (Aff4-003) 53404547-53409530 retained_intron
ENSMUSG00000082263 (Gm11188)
predicted gene 11188 		ENSMUST00000122382 (Gm11188-001) 53345290-53345677 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002BQ_0001ENSDARG00000004754ENSDART00000021037ENSDART00000148630ENSDARG00000091092ENSDART00000115192ENSDART00000121725ENSDART00000151249ENSDART00000151362CIL_0002BQ_0002ENSMUSG00000018239ENSMUST00000018383ENSMUST00000141585ENSMUSG00000049470ENSMUST00000060945ENSMUST00000129019ENSMUST00000130152ENSMUST00000136470ENSMUST00000139054ENSMUST00000152616ENSMUST00000153821ENSMUST00000154499ENSMUSG00000082263ENSMUST00000122382
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002BQ_0001ENSDARG00000004754ENSDART00000021037ENSDARG00000091092ENSDART00000115192ENSDART00000121725CIL_0002BQ_0002ENSMUSG00000018239ENSMUST00000018383ENSMUSG00000049470ENSMUST00000060945ENSMUST00000153821ENSMUSG00000082263ENSMUST00000122382
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004754 ENSDART00000021037 N/A N/A N/A 18.316±1.28 N/A N/A 26.500±5.16 21.364±0.00 18.562±0.00 N/A 11.295±0.00 N/A N/A N/A
ENSDART00000148630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091092 ENSDART00000115192 N/A N/A N/A 0.857±0.28 N/A N/A 4.009±0.66 5.141±2.10 N/A N/A N/A N/A N/A N/A
ENSDART00000121725 N/A N/A N/A N/A N/A N/A 0.828±0.00 1.283±0.73 N/A N/A N/A N/A N/A N/A
ENSDART00000151249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018239 ENSMUST00000018383 2.852±0.77 8.464±1.94 4.416±0.02 3.570±1.19 3.732±0.77 2.391±0.96 1.557±0.63 2.495±0.79 4.425±3.30 2.872±0.57 2.748±0.47 6.333±2.38 7.748±3.78 1.750±0.58
ENSMUST00000141585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049470 ENSMUST00000060945 12.895±5.00 10.594±1.24 9.930±3.98 12.130±6.35 10.466±2.00 7.127±3.12 5.092±1.10 7.572±1.85 2.834±0.74 13.384±1.56 3.434±1.42 14.061±6.21 13.588±6.10 5.851±2.04
ENSMUST00000129019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.173±0.00
ENSMUST00000154499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082263 ENSMUST00000122382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 0.132±0.02

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