C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta precursor protein (cytoplasmic tail) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018625 Appbp2-001 ENSMUSG00000018481 10090 - 11:85187262-85235130 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018625
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018625 8.613±2.22 8.257±0.84 10.875±0.06 14.272±5.16 5.552±2.10 4.748±1.70 3.567±0.63 7.573±0.28 5.538±1.86 6.608±2.53 2.066±0.24 10.107±4.43 16.096±5.12 6.626±1.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000701 CIL_000701_0002 CGP 11:85170404-85235130
CIL_000704 CIL_000704_0002 CGP 11:85187262-85347066

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005874 IEA microtubule
GO:0015031 IEA protein transport
GO:0030659 IEA cytoplasmic vesicle membrane
GO:0046907 IEA intracellular transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000083182 APPBP2-001 protein_coding Homo_sapiens 0 2996
ENST00000585368 APPBP2-003 protein_coding Homo_sapiens 0 532
ENST00000588668 APPBP2-004 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000589341 APPBP2-002 nonsense_mediated_decay Homo_sapiens 0 1853
ENST00000590244 APPBP2-005 processed_transcript Homo_sapiens 0 734
ENST00000592995 APPBP2-006 processed_transcript Homo_sapiens 6e-40 171

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