C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crystallin, alpha A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019192 Cryaa-201 ENSMUSG00000024041 10090 + 17:31677933-31681722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000019192
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000019192 0.024±0.00 0.007±0.00 0.062±0.05 0.122±0.08 0.038±0.00 0.051±0.01 0.241±0.06 0.024±0.00 0.302±0.03 0.137±0.08 1.006±0.51 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000P2 CIL_0000P2_0002 CGP 17:31647082-31681722
CIL_0001M3 CIL_0001M3_0002 CGP 17:31677933-31855792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IMP response to hypoxia
GO:0001934 IMP positive regulation of protein phosphorylation
GO:0002088 IMP lens development in camera-type eye
GO:0002089 IMP lens morphogenesis in camera-type eye
GO:0005212 TAS structural constituent of eye lens
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0006457 IEA protein folding
GO:0006915 IMP apoptotic process
GO:0007005 IMP mitochondrion organization
GO:0007015 IMP actin filament organization
GO:0007017 IMP microtubule-based process
GO:0007021 IMP tubulin complex assembly
GO:0010288 IEA response to lead ion
GO:0010629 IMP negative regulation of gene expression
GO:0030307 IMP positive regulation of cell growth
GO:0042493 IEA response to drug
GO:0042542 IMP response to hydrogen peroxide
GO:0042802 IEA identical protein binding
GO:0043010 IGI camera-type eye development
GO:0043066 IMP negative regulation of apoptotic process
GO:0043154 IGI negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0046872 IEA metal ion binding
GO:0048596 IMP embryonic camera-type eye morphogenesis
GO:0051260 IEA protein homooligomerization
GO:0051384 IEA response to glucocorticoid
GO:0060561 IGI apoptotic process involved in morphogenesis
GO:0070141 IMP response to UV-A
GO:0070309 IMP lens fiber cell morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291554 CRYAA-001 protein_coding Homo_sapiens 0 313
ENST00000482775 CRYAA-002 processed_transcript Homo_sapiens 0 712
ENST00000619537 CRYAA-001 protein_coding Homo_sapiens 0 307

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