C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001M3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160202-ENSG00000142178 CGP 9606 21:43169008-43427128
GeneTranscriptPositionBiotype
ENSG00000142178 (SIK1)
salt-inducible kinase 1 		ENST00000270162 (SIK1-001) 43414515-43427128 protein_coding
ENST00000478426 (SIK1-002) 43421112-43422005 retained_intron
ENSG00000160202 (CRYAA)
crystallin, alpha A 		ENST00000291554 (CRYAA-001) 43169008-43172805 protein_coding
ENST00000398132 (CRYAA-004) 43170156-43172519 protein_coding
ENST00000398133 (CRYAA-003) 43169601-43172294 protein_coding
ENST00000468016 (CRYAA-005) 43170227-43172638 retained_intron
ENST00000482775 (CRYAA-002) 43169087-43172805 processed_transcript
ENSG00000225637 (AP001046.6)
 ENST00000435702 (AP001046.6-001) 43363332-43366566 lincRNA
ENSG00000237989 (AP001046.5)
 ENST00000442815 (AP001046.5-001) 43358147-43362349 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001M3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024041-ENSMUSG00000024042 CGP 10090 17:31677933-31855792
GeneTranscriptPositionBiotype
ENSMUSG00000024041 (Cryaa)
crystallin, alpha A 		ENSMUST00000019192 (Cryaa-201) 31677933-31681722 protein_coding
ENSMUSG00000024042 (Sik1)
salt inducible kinase 1 		ENSMUST00000024839 (Sik1-201) 31844248-31855792 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M3_0001ENSG00000142178ENST00000270162ENST00000478426ENSG00000160202ENST00000291554ENST00000398132ENST00000398133ENST00000468016ENST00000482775ENSG00000225637ENST00000435702ENSG00000237989ENST00000442815CIL_0001M3_0002ENSMUSG00000024041ENSMUST00000019192ENSMUSG00000024042ENSMUST00000024839
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M3_0001ENSG00000142178ENST00000270162ENST00000478426ENSG00000160202ENST00000291554ENST00000398132ENSG00000225637ENST00000435702ENSG00000237989ENST00000442815CIL_0001M3_0002ENSMUSG00000024041ENSMUST00000019192ENSMUSG00000024042ENSMUST00000024839
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142178 ENST00000270162 3.984±0.00 0.480±0.00 0.199±0.00 0.119±0.00 0.069±0.00 0.037±0.03 0.225±0.14 0.073±0.00 0.115±0.02 0.599±0.52 0.064±0.00 1.553±1.71 0.518±0.60 0.347±0.00
ENST00000478426 N/A N/A N/A 0.157±0.00 0.317±0.07 0.043±0.00 N/A 0.095±0.00 0.162±0.00 N/A N/A 0.637±0.28 0.105±0.00 N/A
ENSG00000160202 ENST00000291554 N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENST00000398132 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A 0.209±0.00 N/A N/A
ENST00000398133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225637 ENST00000435702 0.023±0.00 N/A N/A N/A 0.009±0.00 N/A 0.012±0.00 0.227±0.00 N/A 0.049±0.00 N/A 0.046±0.02 0.027±0.00 0.048±0.01
ENSG00000237989 ENST00000442815 0.436±0.00 1.110±0.00 0.170±0.00 0.328±0.00 0.084±0.03 0.419±0.00 0.233±0.21 0.118±0.01 0.060±0.01 0.187±0.14 0.112±0.00 0.567±0.18 0.502±0.12 0.354±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024041 ENSMUST00000019192 0.024±0.00 N/A 0.007±0.00 0.062±0.05 0.122±0.08 0.038±0.00 0.051±0.01 0.241±0.06 0.024±0.00 0.302±0.03 N/A 0.137±0.08 1.006±0.51 0.025±0.00
ENSMUSG00000024042 ENSMUST00000024839 11.129±4.53 10.059±4.04 11.033±5.63 3.322±1.69 15.494±6.75 6.079±0.28 4.726±2.13 16.611±3.91 3.144±1.11 31.495±8.34 2.247±0.49 12.038±2.92 8.437±1.00 5.103±3.27

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