C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000P2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160201-ENSG00000160202 CGP 9606 21:43092956-43172805
GeneTranscriptPositionBiotype
ENSG00000160202 (CRYAA)
crystallin, alpha A 		ENST00000291554 (CRYAA-001) 43169008-43172805 protein_coding
ENST00000398132 (CRYAA-004) 43170156-43172519 protein_coding
ENST00000398133 (CRYAA-003) 43169601-43172294 protein_coding
ENST00000468016 (CRYAA-005) 43170227-43172638 retained_intron
ENST00000482775 (CRYAA-002) 43169087-43172805 processed_transcript
ENSG00000236663 (AP001631.9)
 ENST00000424933 (AP001631.9-001) 43140523-43141092 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0000P2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061613-ENSMUSG00000024041 CGP 10090 17:31647082-31681722
GeneTranscriptPositionBiotype
ENSMUSG00000024041 (Cryaa)
crystallin, alpha A 		ENSMUST00000019192 (Cryaa-201) 31677933-31681722 protein_coding
ENSMUSG00000061613 (U2af1)
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 		ENSMUST00000014684 (U2af1-201) 31647082-31658754 protein_coding
ENSMUST00000166526 (U2af1-202) 31647082-31658754 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P2_0001ENSG00000160202ENST00000291554ENST00000398132ENST00000398133ENST00000468016ENST00000482775ENSG00000236663ENST00000424933CIL_0000P2_0002ENSMUSG00000024041ENSMUST00000019192ENSMUSG00000061613ENSMUST00000014684ENSMUST00000166526
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P2_0001ENSG00000160202ENST00000291554ENST00000398132ENSG00000236663ENST00000424933CIL_0000P2_0002ENSMUSG00000024041ENSMUST00000019192ENSMUSG00000061613ENSMUST00000014684ENSMUST00000166526
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160202 ENST00000291554 N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENST00000398132 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A 0.209±0.00 N/A N/A
ENST00000398133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236663 ENST00000424933 N/A 0.416±0.00 N/A N/A 0.323±0.00 0.116±0.00 N/A N/A N/A 0.248±0.08 N/A 3.670±3.33 0.215±0.02 0.350±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024041 ENSMUST00000019192 0.024±0.00 N/A 0.007±0.00 0.062±0.05 0.122±0.08 0.038±0.00 0.051±0.01 0.241±0.06 0.024±0.00 0.302±0.03 N/A 0.137±0.08 1.006±0.51 0.025±0.00
ENSMUSG00000061613 ENSMUST00000014684 18.655±4.86 3.714±0.70 55.130±5.70 46.991±13.93 9.344±3.00 9.762±2.69 10.858±1.09 20.988±3.90 56.807±43.72 11.423±1.13 23.149±2.18 26.385±23.25 81.475±27.52 12.762±4.73
ENSMUST00000166526 N/A N/A 9.667±1.14 16.444±0.00 N/A N/A 3.718±0.60 3.603±0.07 23.686±4.84 N/A 3.227±0.53 8.168±3.16 21.541±8.64 6.732±0.49

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