C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019470 Psme3-001 ENSMUSG00000078652 10090 + 11:101316213-101323537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019470
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019470 32.260±1.31 34.025±6.03 29.321±2.18 38.247±17.10 29.666±6.70 25.294±3.36 22.407±5.13 30.789±7.80 62.019±46.40 23.997±0.89 18.466±1.01 29.467±6.41 34.120±15.48 27.107±11.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S9 CIL_0005S9_0002 CGP 11:101285952-101323537
CIL_0004MA CIL_0004MA_0002 CGP 11:101316213-101329702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002039 ISS p53 binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0007049 IEA cell cycle
GO:0008537 IEA proteasome activator complex
GO:0010950 IEA positive regulation of endopeptidase activity
GO:0016020 IEA membrane
GO:0061133 IEA endopeptidase activator activity
GO:0061136 IEA regulation of proteasomal protein catabolic process
GO:0097371 ISS MDM2/MDM4 family protein binding
GO:2001237 ISS negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293362 PSME3-002 protein_coding Homo_sapiens 0 1463
ENST00000441946 PSME3-004 protein_coding Homo_sapiens 0 1964
ENST00000541124 PSME3-201 protein_coding Homo_sapiens 0 1380
ENST00000543428 PSME3-005 nonsense_mediated_decay Homo_sapiens 0 745
ENST00000545225 PSME3-006 protein_coding Homo_sapiens 0 2002
ENST00000585805 PSME3-003 protein_coding Homo_sapiens 0 634
ENST00000586114 PSME3-015 protein_coding Homo_sapiens 0 691
ENST00000586312 PSME3-008 nonsense_mediated_decay Homo_sapiens 0 682
ENST00000589469 PSME3-013 protein_coding Homo_sapiens 0 800
ENST00000590720 PSME3-001 protein_coding Homo_sapiens 0 1400
ENST00000591152 PSME3-009 protein_coding Homo_sapiens 0 726
ENST00000591722 PSME3-011 retained_intron Homo_sapiens 0 616
ENST00000592169 PSME3-012 protein_coding Homo_sapiens 0 931
ENST00000592578 PSME3-010 processed_transcript Homo_sapiens 0 285
ENST00000593111 PSME3-014 retained_intron Homo_sapiens 0 625
ENST00000622892 PSME3-202 protein_coding Homo_sapiens 0 1441

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