C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipid scramblase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019605 Plscr3-001 ENSMUSG00000019461 10090 + 11:69846676-69851043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019605 22.779±1.82 11.701±1.38 23.615±4.87 15.745±13.17 12.744±2.67 10.143±1.60 3.628±0.66 5.359±0.66 8.498±7.19 23.277±2.86 2.084±0.73 21.003±3.44 6.903±1.36 1.488±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0017124 IEA SH3 domain binding
GO:0042593 IMP glucose homeostasis
GO:0042632 IMP cholesterol homeostasis
GO:0071222 IEP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324822 TMEM256-PLSCR3-001 protein_coding Homo_sapiens 0 1026
ENST00000535512 TMEM256-PLSCR3-201 protein_coding Homo_sapiens 0 1064
ENST00000570600 C17orf61-PLSCR3-002 nonsense_mediated_decay Homo_sapiens 0 1064
ENST00000571078 TMEM256-PLSCR3-011 protein_coding Homo_sapiens 0 381
ENST00000571125 C17orf61-PLSCR3-004 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000571541 TMEM256-PLSCR3-007 retained_intron Homo_sapiens 0 713
ENST00000571802 TMEM256-PLSCR3-010 protein_coding Homo_sapiens 0 416
ENST00000573070 TMEM256-PLSCR3-002 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000573213 TMEM256-PLSCR3-009 protein_coding Homo_sapiens 0 350
ENST00000573331 C17orf61-PLSCR3-001 nonsense_mediated_decay Homo_sapiens 0 1232
ENST00000573774 TMEM256-PLSCR3-005 retained_intron Homo_sapiens 0 1011
ENST00000574401 TMEM256-PLSCR3-003 protein_coding Homo_sapiens 0 1064
ENST00000575434 TMEM256-PLSCR3-013 protein_coding Homo_sapiens 0 433
ENST00000575543 TMEM256-PLSCR3-006 retained_intron Homo_sapiens 0 499
ENST00000576201 TMEM256-PLSCR3-004 protein_coding Homo_sapiens 0 1232
ENST00000576362 TMEM256-PLSCR3-008 protein_coding Homo_sapiens 0 564
ENST00000619711 TMEM256-PLSCR3-202 protein_coding Homo_sapiens 0 1057

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