C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TMEM256-PLSCR3 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574401 TMEM256-PLSCR3-003 ENSG00000187838 9606 - 17:7389733-7394807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaENST00000574401
Transcript ID Brain Liver Ovary Placenta
ENST00000574401 3.029±0.00 0.968±0.00 12.487±0.00 4.824±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SR CIL_0006SR_0002 CGP 17:7380534-7394843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005886 NAS plasma membrane
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0017121 NAS phospholipid scrambling
GO:0017124 IEA SH3 domain binding
GO:0017128 NAS phospholipid scramblase activity
GO:0048306 IPI calcium-dependent protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108633 Plscr3-201 protein_coding Mus_musculus 0 1085
ENSMUST00000019605 Plscr3-001 protein_coding Mus_musculus 0 1064
ENSMUST00000108632 Plscr3-002 protein_coding Mus_musculus 0 1064
ENSMUST00000152566 Plscr3-003 protein_coding Mus_musculus 0 780

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