C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TMEM256-PLSCR3 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324822 TMEM256-PLSCR3-001 ENSG00000187838 9606 - 17:7389727-7394570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryPlacentaTestisENST00000324822
Transcript ID Adipose Adrenal Breast Colon Ovary Placenta Testis
ENST00000324822 11.998±0.00 28.193±0.00 14.854±0.00 8.666±0.00 13.878±0.01 12.096±6.36 8.851±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SR CIL_0006SR_0002 CGP 17:7380534-7394843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005886 NAS plasma membrane
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0017121 NAS phospholipid scrambling
GO:0017124 IEA SH3 domain binding
GO:0017128 NAS phospholipid scramblase activity
GO:0048306 IPI calcium-dependent protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108633 Plscr3-201 protein_coding Mus_musculus 0 1026
ENSMUST00000019605 Plscr3-001 protein_coding Mus_musculus 0 1026
ENSMUST00000108632 Plscr3-002 protein_coding Mus_musculus 0 1026
ENSMUST00000152566 Plscr3-003 protein_coding Mus_musculus 0 719

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