C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110001J03 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019833 1110001J03Rik-001 ENSMUSG00000019689 10090 + 6:38534823-38539449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019833 79.853±9.55 281.247±33.24 48.188±3.76 33.200±11.51 112.176±45.17 145.716±22.80 169.305±38.05 234.406±9.73 80.913±31.01 68.521±7.75 71.318±7.15 132.436±53.48 16.880±7.44 21.704±10.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QB CIL_0002QB_0002 CGP 6:38433950-38539449
CIL_00030D CIL_00030D_0002 CGP 6:38533502-38609470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297534 C7orf55-001 protein_coding Homo_sapiens 0 459
ENST00000468383 C7orf55-005 processed_transcript Homo_sapiens 0 302
ENST00000481123 C7orf55-002 processed_transcript Homo_sapiens 0 302
ENST00000482181 C7orf55-003 processed_transcript Homo_sapiens 0 283
ENST00000488886 C7orf55-004 processed_transcript Homo_sapiens 0 300

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