C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00030D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164898-ENSG00000146963 CGP 9606 7:139339457-139423457
GeneTranscriptPositionBiotype
ENSG00000146963 (C7orf55-LUC7L2)
C7orf55-LUC7L2 readthrough 		ENST00000263545 (C7orf55-LUC7L2-201) 139371412-139423457 protein_coding
ENST00000354926 (C7orf55-LUC7L2-001) 139359908-139423452 protein_coding
ENST00000435096 (C7orf55-LUC7L2-008) 139359908-139374555 retained_intron
ENST00000456182 (C7orf55-LUC7L2-003) 139359912-139423151 nonsense_mediated_decay
ENST00000463912 (C7orf55-LUC7L2-004) 139374673-139412825 retained_intron
ENST00000482860 (C7orf55-LUC7L2-007) 139416125-139423156 processed_transcript
ENST00000498518 (C7orf55-LUC7L2-006) 139375204-139423201 retained_intron
ENST00000541170 (C7orf55-LUC7L2-005) 139340359-139422511 protein_coding
ENST00000608368 (C7orf55-LUC7L2-009) 139359512-139398624 nonsense_mediated_decay
ENST00000619796 (C7orf55-LUC7L2-202) 139359846-139423457 protein_coding
ENSG00000269955 (LUC7L2)
LUC7-like 2 (S. cerevisiae) 		ENST00000541515 (LUC7L2-001) 139341360-139422599 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00030D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019689-ENSMUSG00000029823 CGP 10090 6:38533502-38609470
GeneTranscriptPositionBiotype
ENSMUSG00000019689 (1110001J03Rik)
RIKEN cDNA 1110001J03 gene 		ENSMUST00000019833 (1110001J03Rik-001) 38534823-38539449 protein_coding
ENSMUST00000147651 (1110001J03Rik-002) 38533502-38539448 processed_transcript
ENSMUSG00000029823 (Luc7l2)
LUC7-like 2 (S. cerevisiae) 		ENSMUST00000057692 (Luc7l2-001) 38551465-38609470 protein_coding
ENSMUST00000159936 (Luc7l2-010) 38555723-38589286 nonsense_mediated_decay
ENSMUST00000160430 (Luc7l2-012) 38570102-38606026 protein_coding
ENSMUST00000160511 (Luc7l2-007) 38557641-38608939 nonsense_mediated_decay
ENSMUST00000160582 (Luc7l2-006) 38551843-38585106 processed_transcript
ENSMUST00000160922 (Luc7l2-008) 38551531-38558049 retained_intron
ENSMUST00000161227 (Luc7l2-002) 38551803-38609427 protein_coding
ENSMUST00000161538 (Luc7l2-003) 38551465-38606367 protein_coding
ENSMUST00000162386 (Luc7l2-005) 38551514-38609468 nonsense_mediated_decay
ENSMUST00000162530 (Luc7l2-013) 38559215-38569565 retained_intron
ENSMUST00000162718 (Luc7l2-009) 38551531-38557918 processed_transcript
ENSMUST00000163012 (Luc7l2-011) 38551531-38554007 processed_transcript
ENSMUST00000163047 (Luc7l2-004) 38551334-38605040 protein_coding
ENSMUSG00000081670 (Gm15697)
predicted gene 15697 		ENSMUST00000121946 (Gm15697-001) 38542303-38546074 unprocessed_pseudogene
ENSMUSG00000097206 (Gm26699)
predicted gene, 26699 		ENSMUST00000180825 (Gm26699-201) 38551531-38554007 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030D_0001ENSG00000146963ENST00000263545ENST00000354926ENST00000435096ENST00000456182ENST00000463912ENST00000482860ENST00000498518ENST00000541170ENST00000608368ENST00000619796ENSG00000269955ENST00000541515CIL_00030D_0002ENSMUSG00000019689ENSMUST00000019833ENSMUST00000147651ENSMUSG00000029823ENSMUST00000057692ENSMUST00000159936ENSMUST00000160430ENSMUST00000160511ENSMUST00000160582ENSMUST00000160922ENSMUST00000161227ENSMUST00000161538ENSMUST00000162386ENSMUST00000162530ENSMUST00000162718ENSMUST00000163012ENSMUST00000163047ENSMUSG00000081670ENSMUST00000121946ENSMUSG00000097206ENSMUST00000180825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030D_0001ENSG00000146963ENST00000263545ENST00000354926ENST00000435096ENST00000456182ENST00000463912ENST00000482860ENST00000498518ENST00000541170ENSG00000269955ENST00000541515CIL_00030D_0002ENSMUSG00000019689ENSMUST00000019833ENSMUST00000147651ENSMUSG00000029823ENSMUST00000057692ENSMUST00000159936ENSMUST00000160430ENSMUST00000160511ENSMUST00000161227ENSMUST00000161538ENSMUST00000162718ENSMUST00000163047ENSMUSG00000081670ENSMUST00000121946ENSMUSG00000097206ENSMUST00000180825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146963 ENST00000263545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.316±2.82 N/A N/A
ENST00000354926 6.081±0.00 11.944±0.00 N/A 8.449±4.63 5.404±3.19 18.252±0.00 3.715±2.42 13.817±0.00 5.518±0.00 6.914±4.80 7.197±0.00 13.121±5.29 9.044±2.92 18.734±0.00
ENST00000435096 N/A N/A N/A N/A N/A N/A N/A 24.229±0.00 N/A N/A N/A N/A N/A N/A
ENST00000456182 15.198±0.00 16.303±0.00 N/A 11.519±0.00 8.384±0.00 9.070±0.00 5.691±0.00 N/A 5.207±0.00 10.463±0.00 10.064±0.00 26.961±6.66 12.482±8.41 27.923±6.67
ENST00000463912 N/A N/A N/A N/A N/A N/A N/A N/A 3.118±0.00 N/A N/A N/A N/A N/A
ENST00000482860 N/A N/A N/A N/A N/A N/A 1.284±0.00 2.399±0.00 N/A N/A 1.681±0.00 N/A N/A N/A
ENST00000498518 N/A 5.209±0.00 N/A 2.822±0.00 3.800±0.00 3.060±0.00 N/A N/A N/A 5.149±0.00 N/A N/A N/A N/A
ENST00000541170 N/A N/A N/A N/A N/A 3.342±0.00 N/A N/A N/A N/A N/A N/A N/A 15.927±0.00
ENST00000608368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269955 ENST00000541515 12.484±0.00 14.696±0.00 6.463±0.00 12.607±4.17 8.136±4.42 14.378±0.00 8.181±5.12 12.498±8.65 5.208±0.00 5.911±1.84 7.404±4.09 22.995±1.95 11.825±4.46 18.424±1.76
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019689 ENSMUST00000019833 79.853±9.55 281.247±33.24 48.188±3.76 33.200±11.51 112.176±45.17 145.716±22.80 169.305±38.05 234.406±9.73 80.913±31.01 68.521±7.75 71.318±7.15 132.436±53.48 16.880±7.44 21.704±10.43
ENSMUST00000147651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.380±1.98
ENSMUSG00000029823 ENSMUST00000057692 N/A N/A N/A N/A 3.423±0.98 N/A N/A N/A 1.983±0.00 N/A 14.843±2.28 5.847±0.00 N/A N/A
ENSMUST00000159936 N/A N/A N/A N/A 2.849±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160430 10.648±2.21 N/A 11.446±1.10 17.142±5.49 7.098±2.32 10.826±3.01 5.788±0.82 5.536±1.16 8.239±3.15 14.282±2.09 8.403±1.73 18.851±7.26 15.307±0.00 3.625±0.21
ENSMUST00000160511 N/A N/A N/A N/A N/A N/A N/A N/A 9.699±2.56 N/A N/A 29.857±0.00 19.242±2.77 8.640±4.27
ENSMUST00000160582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161227 7.709±1.24 N/A 30.652±0.17 22.490±5.43 3.258±0.00 5.017±0.00 5.272±0.00 5.433±0.66 19.339±11.18 9.944±1.13 15.978±0.00 46.008±13.29 25.055±8.27 16.966±12.12
ENSMUST00000161538 3.439±0.00 6.547±0.04 N/A N/A N/A N/A 3.442±0.46 2.656±0.13 11.832±6.26 N/A 13.328±1.57 N/A 12.643±0.14 N/A
ENSMUST00000162386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162718 N/A N/A N/A N/A 4.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163047 N/A N/A N/A 36.012±0.00 N/A N/A N/A N/A N/A N/A N/A 52.969±0.00 31.209±1.94 13.764±0.00
ENSMUSG00000081670 ENSMUST00000121946 0.046±0.03 N/A 0.023±0.00 0.095±0.00 0.087±0.02 N/A 0.011±0.00 0.016±0.00 0.024±0.01 0.024±0.00 0.008±0.00 0.122±0.06 0.046±0.03 0.085±0.03
ENSMUSG00000097206 ENSMUST00000180825 9.966±2.44 48.347±2.57 N/A N/A 26.064±15.55 17.333±3.02 6.098±0.21 8.875±4.20 8.025±1.92 24.452±4.33 N/A 34.325±4.61 N/A 7.385±0.71

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