C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: popeye domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019994 Popdc3-001 ENSMUSG00000019848 10090 + 10:45289305-45318452 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019994
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019994 0.122±0.03 0.105±0.05 2.561±0.10 0.155±0.10 1.740±0.93 4.231±0.60 0.096±0.02 0.027±0.02 2.933±0.64 10.963±1.25 0.130±0.08 0.665±1.04 0.024±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082P CIL_00082P_0002 VISTA 10:44839829-45441705
CIL_00089G CIL_00089G_0002 VISTA 10:44928613-45531786
CIL_0004CC CIL_0004CC_0002 CGP 10:45178098-45369708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0042391 IGI regulation of membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254765 POPDC3-001 protein_coding Homo_sapiens 0 1062
ENST00000429112 POPDC3-004 protein_coding Homo_sapiens 0 381
ENST00000474760 POPDC3-002 processed_transcript Homo_sapiens 0 486
ENST00000489134 POPDC3-003 processed_transcript Homo_sapiens 0 486

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