C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi associated PDZ and coiled-coil motif containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020008 Gopc-201 ENSMUSG00000019861 10090 - 10:52337024-52382124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020008 2.040±0.58 7.104±0.95 4.967±0.84 3.862±2.96 4.193±1.98 5.101±2.03 2.116±0.45 3.556±0.97 3.226±0.94 5.141±0.41 1.303±0.74 6.044±2.05 4.290±2.12 3.841±1.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005083 IDA small GTPase regulator activity
GO:0005109 IPI frizzled binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005794 ISS Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006914 TAS autophagy
GO:0007289 IMP spermatid nucleus differentiation
GO:0008022 IPI protein C-terminus binding
GO:0015031 IEA protein transport
GO:0016020 ISS membrane
GO:0019905 ISS syntaxin binding
GO:0030054 IEA cell junction
GO:0030140 ISS trans-Golgi network transport vesicle
GO:0042803 IPI protein homodimerization activity
GO:0042995 IEA cell projection
GO:0043234 ISO protein complex
GO:0044325 ISS ion channel binding
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0050790 IDA regulation of catalytic activity
GO:0051260 ISS protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000052569 GOPC-001 protein_coding Homo_sapiens 0 1965
ENST00000368498 GOPC-002 protein_coding Homo_sapiens 0 1341
ENST00000467125 GOPC-003 processed_transcript Homo_sapiens 0 651
ENST00000535237 GOPC-201 protein_coding Homo_sapiens 0 640

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