C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho-related BTB domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020101 Rhobtb1-001 ENSMUSG00000019944 10090 + 10:69212634-69291791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020101 5.205±3.40 0.885±0.00 5.655±1.80 2.909±0.06 0.938±0.11 0.775±0.20 2.342±0.72 4.937±0.57 2.371±1.37 1.343±0.35 2.234±0.97 5.288±1.41 3.273±1.95 1.963±0.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051114 rhobtb2a-201 protein_coding Danio_rerio 2e-30 139
ENSDART00000111587 rhobtb2a-001 protein_coding Danio_rerio 2e-30 139
ENST00000337910 RHOBTB1-002 protein_coding Homo_sapiens 0 2082
ENST00000357917 RHOBTB1-001 protein_coding Homo_sapiens 0 2082
ENST00000461910 RHOBTB1-005 processed_transcript Homo_sapiens 0 296
ENST00000483488 RHOBTB1-003 processed_transcript Homo_sapiens 4e-39 165
ENST00000490827 RHOBTB1-004 processed_transcript Homo_sapiens 0 189
ENST00000496237 RHOBTB1-006 processed_transcript Homo_sapiens 0 196

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