C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymopoietin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556029 TMPO-002 ENSG00000120802 9606 + 12:98515512-98550379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556029
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556029 4.406±0.00 13.318±0.00 2.448±0.93 5.099±1.52 2.773±1.67 1.297±0.68 4.560±0.00 4.494±0.00 6.313±2.58 1.448±1.37 13.772±2.22 7.164±2.27 8.003±4.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0001 VISTA 12:98189717-98793261
CIL_0000VM CIL_0000VM_0002 CGP 12:98515512-98606379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005521 TAS lamin binding
GO:0005634 TAS nucleus
GO:0005635 TAS nuclear envelope
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072239 Tmpo-202 protein_coding Mus_musculus 0 2060
ENSMUST00000092219 Tmpo-203 protein_coding Mus_musculus 0 1074
ENSMUST00000099355 Tmpo-204 protein_coding Mus_musculus 0 918
ENSMUST00000105293 Tmpo-205 protein_coding Mus_musculus 0 806
ENSMUST00000020123 Tmpo-201 protein_coding Mus_musculus 0 691

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