C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90kDa beta (Grp94), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299767 HSP90B1-001 ENSG00000166598 9606 + 12:103930334-103947926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299767 101.231±0.00 235.799±0.00 27.746±0.00 47.462±23.97 101.720±8.43 140.349±102.97 41.646±27.21 160.085±54.41 197.688±162.48 126.130±70.19 15.099±11.41 167.733±61.81 298.515±83.16 141.003±1.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IDA response to hypoxia
GO:0002224 TAS toll-like receptor signaling pathway
GO:0003723 IDA RNA binding
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0015031 NAS protein transport
GO:0016020 IDA membrane
GO:0019903 IDA protein phosphatase binding
GO:0030433 IMP ER-associated ubiquitin-dependent protein catabolic process
GO:0030496 IDA midbody
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0031012 IDA extracellular matrix
GO:0031247 IDA actin rod assembly
GO:0043066 IMP negative regulation of apoptotic process
GO:0043666 IDA regulation of phosphoprotein phosphatase activity
GO:0044267 TAS cellular protein metabolic process
GO:0045087 TAS innate immune response
GO:0046790 IPI virion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050750 IDA low-density lipoprotein particle receptor binding
GO:0051082 IEA unfolded protein binding
GO:0051208 NAS sequestering of calcium ion
GO:0070062 IDA extracellular vesicular exosome
GO:0071318 IDA cellular response to ATP
GO:0071682 TAS endocytic vesicle lumen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020238 Hsp90b1-001 protein_coding Mus_musculus 0 3548
ENSMUST00000129178 Hsp90b1-002 retained_intron Mus_musculus 0 2370
ENSMUST00000129413 Hsp90b1-003 protein_coding Mus_musculus 0 1286
ENSMUST00000134515 Hsp90b1-004 retained_intron Mus_musculus 0 647
ENSMUST00000146897 Hsp90b1-005 retained_intron Mus_musculus 0 257

Loading