C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenylalanine hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020241 Pah-001 ENSMUSG00000020051 10090 + 10:87521795-87584136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020241
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020241 0.063±0.00 0.120±0.08 0.006±0.00 0.569±0.46 0.161±0.07 0.071±0.04 328.204±52.03 163.433±136.14 0.072±0.04 0.119±0.00 0.212±0.12 0.018±0.00 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WM CIL_0007WM_0002 VISTA 10:86992836-87593886
CIL_00083Z CIL_00083Z_0002 VISTA 10:87024267-87626929
CIL_0008OX CIL_0008OX_0002 VISTA 10:87088706-87689893
CIL_0008TA CIL_0008TA_0002 VISTA 10:87145159-87749773
CIL_0009AL CIL_0009AL_0002 VISTA 10:87146548-87749489
CIL_0008NV CIL_0008NV_0002 VISTA 10:87146634-87748659
CIL_0008WZ CIL_0008WZ_0002 VISTA 10:87173282-87774591
CIL_0008O5 CIL_0008O5_0002 VISTA 10:87200258-87801668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004505 IMP phenylalanine 4-monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0006559 IEA L-phenylalanine catabolic process
GO:0016597 IEA amino acid binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307000 PAH-002 protein_coding Homo_sapiens 0 1515
ENST00000546844 PAH-009 protein_coding Homo_sapiens 0 366
ENST00000548928 PAH-011 processed_transcript Homo_sapiens 0 285
ENST00000549111 PAH-003 retained_intron Homo_sapiens 0 793
ENST00000549247 PAH-014 retained_intron Homo_sapiens 0 606
ENST00000550978 PAH-012 retained_intron Homo_sapiens 0 468
ENST00000551114 PAH-015 retained_intron Homo_sapiens 0 363
ENST00000551337 PAH-005 protein_coding Homo_sapiens 0 449
ENST00000551988 PAH-013 processed_transcript Homo_sapiens 0 494
ENST00000553106 PAH-001 protein_coding Homo_sapiens 0 1591

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