C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0008NV_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs998 | VISTA | 9606 | 12:102712346-103314376  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000139352  (ASCL1)achaete-scute family bHLH transcription factor 1 |
ENST00000266744 (ASCL1-001)
|
102957686-102960516 | protein_coding | |
|
ENSG00000171759 (PAH) phenylalanine hydroxylase |
ENST00000307000 (PAH-002)
|
102838321-102917254 | protein_coding | |
|
ENST00000546708 (PAH-007)
|
102917172-102950850 | processed_transcript | ||
|
ENST00000546844 (PAH-009)
|
102894735-102950846 | protein_coding | ||
|
ENST00000547319 (PAH-004)
|
102916573-102958410 | processed_transcript | ||
|
ENST00000548677 (PAH-010)
|
102894803-102915192 | processed_transcript | ||
|
ENST00000548928 (PAH-011)
|
102886045-102912880 | processed_transcript | ||
|
ENST00000549111 (PAH-003)
|
102854686-102917226 | retained_intron | ||
|
ENST00000549247 (PAH-014)
|
102843646-102853415 | retained_intron | ||
|
ENST00000550405 (PAH-008)
|
102946582-102950845 | retained_intron | ||
|
ENST00000550978 (PAH-012)
|
102877286-102917114 | retained_intron | ||
|
ENST00000551114 (PAH-015)
|
102843714-102852260 | retained_intron | ||
|
ENST00000551337 (PAH-005)
|
102877495-102958366 | protein_coding | ||
|
ENST00000551988 (PAH-013)
|
102855279-102917219 | processed_transcript | ||
|
ENST00000552251 (PAH-006)
|
102945088-102950868 | processed_transcript | ||
|
ENST00000553106 (PAH-001)
|
102836885-102917603 | protein_coding | ||
|
ENSG00000179088 (C12orf42) chromosome 12 open reading frame 42 |
ENST00000378113 (C12orf42-201)
|
103301943-103496010 | protein_coding | |
|
ENST00000546526 (C12orf42-006)
|
103268542-103495958 | processed_transcript | ||
|
ENST00000547347 (C12orf42-004)
|
103237591-103495968 | nonsense_mediated_decay | ||
|
ENST00000547470 (C12orf42-015)
|
103262267-103267892 | processed_transcript | ||
|
ENST00000548048 (C12orf42-003)
|
103301955-103495966 | protein_coding | ||
|
ENST00000548196 (C12orf42-005)
|
103476900-103495971 | processed_transcript | ||
|
ENST00000548789 (C12orf42-008)
|
103305974-103495946 | processed_transcript | ||
|
ENST00000548883 (C12orf42-001)
|
103301943-103495968 | protein_coding | ||
|
ENST00000549927 (C12orf42-013)
|
103262270-103269853 | processed_transcript | ||
|
ENST00000550497 (C12orf42-009)
|
103349123-103495925 | processed_transcript | ||
|
ENST00000550650 (C12orf42-011)
|
103267609-103441591 | processed_transcript | ||
|
ENST00000551134 (C12orf42-002)
|
103301955-103495971 | nonsense_mediated_decay | ||
|
ENST00000551303 (C12orf42-014)
|
103263308-103267925 | processed_transcript | ||
|
ENST00000552372 (C12orf42-012)
|
103396493-103456275 | processed_transcript | ||
|
ENST00000552578 (C12orf42-007)
|
103305982-103495953 | protein_coding | ||
|
ENST00000552977 (C12orf42-010)
|
103269820-103441595 | processed_transcript | ||
|
ENSG00000257703 (RP11-328J6.1) |
ENST00000548415 (RP11-328J6.1-001)
|
103081090-103178401 | lincRNA | |
|
ENST00000548594 (RP11-328J6.1-002)
|
103080950-103178675 | lincRNA | ||
|
ENSG00000257860 (RP11-552I14.1) |
ENST00000547418 (RP11-552I14.1-002)
|
103151842-103168234 | lincRNA | |
|
ENST00000549568 (RP11-552I14.1-003)
|
103162856-103168309 | lincRNA | ||
|
ENST00000550664 (RP11-552I14.1-005)
|
103162911-103168309 | lincRNA | ||
|
ENST00000552759 (RP11-552I14.1-001)
|
103151855-103161642 | lincRNA | ||
|
ENSG00000258169 (LINC00485) long intergenic non-protein coding RNA 485 |
ENST00000547179 (LINC00485-001)
|
102809280-102824399 | lincRNA | |
| CIL_0008NV_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs998 | VISTA | 10090 | 10:87146634-87748659 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020051 (Pah) phenylalanine hydroxylase |
ENSMUST00000020241 (Pah-001)
|
87521795-87584136 | protein_coding | |
|
ENSMUST00000133293 (Pah-002)
|
87546673-87570332 | protein_coding | ||
|
ENSMUST00000142088 (Pah-004)
|
87521930-87584034 | protein_coding | ||
|
ENSMUST00000143624 (Pah-003)
|
87522027-87583855 | protein_coding | ||
|
ENSMUSG00000020052 (Ascl1) achaete-scute complex homolog 1 (Drosophila) |
ENSMUST00000020243 (Ascl1-001)
|
87490819-87493660 | protein_coding | |
|
ENSMUSG00000047129 (1700113H08Rik) RIKEN cDNA 1700113H08 gene |
ENSMUST00000169849 (1700113H08Rik-001)
|
87058046-87230588 | protein_coding | |
|
ENSMUST00000189456 (1700113H08Rik-003)
|
87058045-87230589 | protein_coding | ||
|
ENSMUST00000189775 (1700113H08Rik-002)
|
87205979-87230587 | protein_coding | ||
Expression Patterns
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