C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299314 GNPTAB-001 ENSG00000111670 9606 - 12:101745497-101830938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299314 5.564±0.00 7.648±0.00 1.615±0.00 8.765±0.17 5.857±0.80 5.136±0.55 3.395±1.65 5.365±0.00 2.134±0.38 5.659±0.57 1.402±0.81 3.973±0.82 4.280±0.65 4.888±2.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0003976 IDA UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005794 IDA Golgi apparatus
GO:0007040 IMP lysosome organization
GO:0008134 IEA transcription factor binding
GO:0009306 IEA protein secretion
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030154 IEA cell differentiation
GO:0046835 IDA carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020251 Gnptab-001 protein_coding Mus_musculus 0 2603
ENSMUST00000151273 Gnptab-002 nonsense_mediated_decay Mus_musculus 0 2109
ENSMUST00000141343 Gnptab-004 processed_transcript Mus_musculus 0 1157
ENSMUST00000132738 Gnptab-008 processed_transcript Mus_musculus 0 695
ENSMUST00000127615 Gnptab-005 protein_coding Mus_musculus 0 630
ENSMUST00000130301 Gnptab-006 protein_coding Mus_musculus 0 577
ENSMUST00000155306 Gnptab-007 retained_intron Mus_musculus 0 479

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