C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin associated and neddylation disassociated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020315 Cand1-001 ENSMUSG00000020114 10090 - 10:119199255-119240055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020315 5.013±1.41 9.805±4.12 4.873±1.99 10.440±2.90 6.097±2.42 5.714±1.67 1.745±0.21 4.339±0.89 2.721±0.72 5.330±0.96 0.887±0.31 9.620±3.96 12.696±5.84 4.533±1.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 ISS ubiquitin ligase complex
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0010265 ISS SCF complex assembly
GO:0016020 IEA membrane
GO:0016567 ISS protein ubiquitination
GO:0017025 IEA TBP-class protein binding
GO:0030154 ISS cell differentiation
GO:0031461 ISS cullin-RING ubiquitin ligase complex
GO:0043086 ISS negative regulation of catalytic activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045899 IEA positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003694 cand1-001 protein_coding Danio_rerio 0 2182
ENST00000295989 CAND2-001 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000446928 CAND2-004 nonsense_mediated_decay Homo_sapiens 0 189
ENST00000456430 CAND2-002 protein_coding Homo_sapiens 0 337
ENST00000535146 CAND1-008 retained_intron Homo_sapiens 0 741
ENST00000540319 CAND1-002 nonsense_mediated_decay Homo_sapiens 0 1709
ENST00000544619 CAND1-003 protein_coding Homo_sapiens 0 2850
ENST00000545606 CAND1-001 protein_coding Homo_sapiens 0 5258

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