C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat containing planar cell polarity effector
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020568 Wdpcp-002 ENSMUSG00000020319 10090 + 11:21572235-21898989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000020568
Transcript ID Testis
ENSMUST00000020568 10.253±3.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0002093 IMP auditory receptor cell morphogenesis
GO:0005515 IPI protein binding
GO:0005856 IEA cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005930 ISS axoneme
GO:0005938 ISS cell cortex
GO:0007224 IMP smoothened signaling pathway
GO:0007399 IMP nervous system development
GO:0010762 IMP regulation of fibroblast migration
GO:0016324 ISS apical plasma membrane
GO:0016476 ISS regulation of embryonic cell shape
GO:0032185 ISS septin cytoskeleton organization
GO:0032880 ISS regulation of protein localization
GO:0042384 IMP cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0043010 IMP camera-type eye development
GO:0044782 IMP cilium organization
GO:0045184 IMP establishment of protein localization
GO:0048568 IGI embryonic organ development
GO:0051893 IMP regulation of focal adhesion assembly
GO:0055123 IMP digestive system development
GO:0060021 IMP palate development
GO:0060271 ISS cilium morphogenesis
GO:0060541 IMP respiratory system development
GO:0072358 IMP cardiovascular system development
GO:0090521 IMP glomerular visceral epithelial cell migration
GO:0097541 IDA axonemal basal plate
GO:1900027 IMP regulation of ruffle assembly
GO:2000114 IMP regulation of establishment of cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272321 WDPCP-002 protein_coding Homo_sapiens 0 1984
ENST00000398544 WDPCP-007 protein_coding Homo_sapiens 0 1443
ENST00000409120 WDPCP-001 protein_coding Homo_sapiens 0 1635
ENST00000409199 WDPCP-008 protein_coding Homo_sapiens 0 1443
ENST00000409354 WDPCP-009 nonsense_mediated_decay Homo_sapiens 0 1147
ENST00000409562 WDPCP-005 protein_coding Homo_sapiens 0 1858
ENST00000409835 WDPCP-004 processed_transcript Homo_sapiens 0 1781
ENST00000417238 WDPCP-003 nonsense_mediated_decay Homo_sapiens 0 1781
ENST00000418148 WDPCP-012 nonsense_mediated_decay Homo_sapiens 0 588
ENST00000462652 WDPCP-014 retained_intron Homo_sapiens 0 329
ENST00000473678 WDPCP-013 protein_coding Homo_sapiens 0 300
ENST00000493315 WDPCP-006 retained_intron Homo_sapiens 0 1166

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