C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat containing planar cell polarity effector
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272321 WDPCP-002 ENSG00000143951 9606 - 2:63121383-63588799 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000976 CIL_000976_0001 VISTA 2:62666720-63267794
CIL_00084N CIL_00084N_0001 VISTA 2:62678793-63279521
CIL_00090Q CIL_00090Q_0001 VISTA 2:62740879-63342178
CIL_00095K CIL_00095K_0001 VISTA 2:62748560-63349968
CIL_0007MW CIL_0007MW_0001 UCNEbase 2:62787578-63424747
CIL_000100 CIL_000100_0002 CGP 2:63050057-63827843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IEA kidney development
GO:0002093 IEA auditory receptor cell morphogenesis
GO:0005515 IEA protein binding
GO:0005856 IEA cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005930 ISS axoneme
GO:0005938 ISS cell cortex
GO:0007224 IEA smoothened signaling pathway
GO:0007399 IEA nervous system development
GO:0010762 IEA regulation of fibroblast migration
GO:0016324 ISS apical plasma membrane
GO:0016476 ISS regulation of embryonic cell shape
GO:0032185 ISS septin cytoskeleton organization
GO:0032880 ISS regulation of protein localization
GO:0042384 IEA cilium assembly
GO:0042733 IEA embryonic digit morphogenesis
GO:0043010 IEA camera-type eye development
GO:0044782 IEA cilium organization
GO:0045184 IEA establishment of protein localization
GO:0048568 IEA embryonic organ development
GO:0051893 IEA regulation of focal adhesion assembly
GO:0055123 IEA digestive system development
GO:0060021 IEA palate development
GO:0060271 ISS cilium morphogenesis
GO:0060541 IEA respiratory system development
GO:0072358 IEA cardiovascular system development
GO:0090521 IEA glomerular visceral epithelial cell migration
GO:0097541 IEA axonemal basal plate
GO:1900027 IEA regulation of ruffle assembly
GO:2000114 IEA regulation of establishment of cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020568 Wdpcp-002 protein_coding Mus_musculus 0 1984
ENSMUST00000149757 Wdpcp-004 processed_transcript Mus_musculus 0 544
ENSMUST00000156624 Wdpcp-001 processed_transcript Mus_musculus 0 420
ENSMUST00000143608 Wdpcp-006 processed_transcript Mus_musculus 2e-39 169

Loading