C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein, alpha 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020930 Gna13-001 ENSMUSG00000020611 10090 + 11:109362831-109401369 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020930
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020930 12.042±1.93 9.155±0.81 11.222±0.23 8.295±3.84 14.190±1.43 19.991±2.22 6.179±0.32 11.885±0.07 6.976±1.48 23.689±1.34 3.730±0.63 14.879±3.37 11.707±5.46 6.288±2.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UC CIL_0007UC_0002 VISTA 11:108969057-109571054

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001569 IMP patterning of blood vessels
GO:0001701 IGI in utero embryonic development
GO:0003924 IBA GTPase activity
GO:0004871 IBA signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005834 IBA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0005925 IEA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0007186 ISA G-protein coupled receptor signaling pathway
GO:0007189 IGI adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007266 IDA Rho protein signal transduction
GO:0008360 IDA regulation of cell shape
GO:0016020 IEA membrane
GO:0030154 IDA cell differentiation
GO:0030168 IMP platelet activation
GO:0030334 IMP regulation of cell migration
GO:0031526 IBA brush border membrane
GO:0031584 IBA activation of phospholipase D activity
GO:0031683 IBA G-protein beta/gamma-subunit complex binding
GO:0031702 IBA type 1 angiotensin receptor binding
GO:0031752 IBA D5 dopamine receptor binding
GO:0035556 IDA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050332 gna12a-001 protein_coding Danio_rerio 7e-27 128
ENST00000275364 GNA12-001 protein_coding Homo_sapiens 1e-37 163
ENST00000439174 GNA13-001 protein_coding Homo_sapiens 0 1855
ENST00000541118 GNA13-002 protein_coding Homo_sapiens 0 1205

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