C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020962 Ubxn2a-001 ENSMUSG00000020634 10090 - 12:4879032-4907705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020962
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020962 6.652±1.75 2.651±0.81 1.938±0.70 5.858±1.11 4.430±0.00 4.059±3.52 4.673±0.47 14.616±0.00 2.529±1.25 6.689±2.22 0.560±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014I CIL_00014I_0002 CGP 12:4862440-4907705
CIL_00014J CIL_00014J_0002 CGP 12:4879032-5044047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005801 IDA cis-Golgi network
GO:0005829 IDA cytosol
GO:0010468 ISO regulation of gene expression
GO:0031396 IDA regulation of protein ubiquitination
GO:0033130 IPI acetylcholine receptor binding
GO:0042176 IDA regulation of protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309033 UBXN2A-001 protein_coding Homo_sapiens 0 924
ENST00000404924 UBXN2A-003 protein_coding Homo_sapiens 0 915
ENST00000446425 UBXN2A-002 processed_transcript Homo_sapiens 0 854
ENST00000479859 UBXN2A-004 retained_intron Homo_sapiens 0 196
ENST00000535786 UBXN2A-201 protein_coding Homo_sapiens 0 529
ENST00000604303 CTC-325H20.7-001 processed_pseudogene Homo_sapiens 0 422
ENST00000610020 RPAP2-001 protein_coding Homo_sapiens 0.00009 57

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