C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: grainyhead-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020985 Grhl1-201 ENSMUSG00000020656 10090 + 12:24580749-24617391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020985 0.260±0.00 0.141±0.06 3.279±1.43 1.685±1.52 0.931±0.51 0.203±0.03 0.074±0.04 0.164±0.09 0.102±0.05 2.315±0.18 0.141±0.12 0.485±0.29 2.923±3.12 1.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MN CIL_0001MN_0002 CGP 12:24498581-24617391
CIL_0007DG CIL_0007DG_0002 CGP 12:24572287-24662774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006355 ISA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324907 GRHL1-001 protein_coding Homo_sapiens 0 1869
ENST00000405379 GRHL1-201 protein_coding Homo_sapiens 0 1290
ENST00000464418 GRHL1-003 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000472167 GRHL1-006 nonsense_mediated_decay Homo_sapiens 0 1760
ENST00000480736 GRHL1-005 protein_coding Homo_sapiens 0 436
ENST00000494520 GRHL1-007 retained_intron Homo_sapiens 0 841
ENST00000497403 GRHL1-002 retained_intron Homo_sapiens 0 881

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