C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: grainyhead-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405379 GRHL1-201 ENSG00000134317 9606 + 2:9961165-10001205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverOvaryPlacentaTestisENST00000405379
Transcript ID Brain Breast Colon Liver Ovary Placenta Testis
ENST00000405379 0.466±0.00 0.723±0.38 0.186±0.02 0.735±0.00 1.147±0.54 1.359±0.00 0.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MN CIL_0001MN_0001 CGP 2:9843354-10002277
CIL_0007DG CIL_0007DG_0001 CGP 2:9951693-10054836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020985 Grhl1-201 protein_coding Mus_musculus 0 1290
ENSMUST00000085553 Grhl1-202 protein_coding Mus_musculus 0 1290
ENSMUST00000022895 Grhl2-001 protein_coding Mus_musculus 0 292
ENSDART00000088994 grhl2b-201 protein_coding Danio_rerio 0 268
ENSDART00000149221 grhl2b-001 protein_coding Danio_rerio 0 268
ENSMUST00000161405 Grhl2-002 protein_coding Mus_musculus 0 263
ENSDART00000148528 grhl2a-002 protein_coding Danio_rerio 0 241
ENSMUST00000161933 Grhl2-003 processed_transcript Mus_musculus 1e-29 135

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