C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001MN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115750-ENSG00000134317 CGP 9606 2:9843354-10002277
GeneTranscriptPositionBiotype
ENSG00000115750 (TAF1B)
TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 		ENST00000263663 (TAF1B-001) 9843354-9934416 protein_coding
ENST00000402170 (TAF1B-009) 9843482-9868764 processed_transcript
ENST00000404869 (TAF1B-008) 9843497-9852124 processed_transcript
ENST00000416181 (TAF1B-007) 9843527-9849407 nonsense_mediated_decay
ENST00000434858 (TAF1B-002) 9843525-9933946 nonsense_mediated_decay
ENST00000469895 (TAF1B-003) 9843585-9868416 processed_transcript
ENST00000480197 (TAF1B-005) 9843703-9868376 processed_transcript
ENST00000490432 (TAF1B-004) 9843723-9852114 processed_transcript
ENST00000492648 (TAF1B-010) 9875998-9913709 protein_coding
ENST00000497182 (TAF1B-006) 9843519-9845820 retained_intron
ENSG00000134317 (GRHL1)
grainyhead-like 1 (Drosophila) 		ENST00000324907 (GRHL1-001) 9951698-10002277 protein_coding
ENST00000405379 (GRHL1-201) 9961165-10001205 protein_coding
ENST00000439493 (GRHL1-004) 9951693-9961082 nonsense_mediated_decay
ENST00000464418 (GRHL1-003) 9951693-10000731 nonsense_mediated_decay
ENST00000472167 (GRHL1-006) 9951782-10000832 nonsense_mediated_decay
ENST00000480736 (GRHL1-005) 9995306-10000866 protein_coding
ENST00000494520 (GRHL1-007) 9960964-9964307 retained_intron
ENST00000497403 (GRHL1-002) 9951693-9966401 retained_intron
ENSG00000269973 (RP11-95D17.1)
 ENST00000602458 (RP11-95D17.1-001) 9936360-9939590 lincRNA
CIL_0001MN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059669-ENSMUSG00000020656 CGP 10090 12:24498581-24617391
GeneTranscriptPositionBiotype
ENSMUSG00000020656 (Grhl1)
grainyhead-like 1 (Drosophila) 		ENSMUST00000020985 (Grhl1-201) 24580749-24617391 protein_coding
ENSMUST00000085553 (Grhl1-202) 24572287-24617387 protein_coding
ENSMUSG00000059669 (Taf1b)
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B 		ENSMUST00000075954 (Taf1b-201) 24498581-24558571 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MN_0001ENSG00000115750ENST00000263663ENST00000402170ENST00000404869ENST00000416181ENST00000434858ENST00000469895ENST00000480197ENST00000490432ENST00000492648ENST00000497182ENSG00000134317ENST00000324907ENST00000405379ENST00000439493ENST00000464418ENST00000472167ENST00000480736ENST00000494520ENST00000497403ENSG00000269973ENST00000602458CIL_0001MN_0002ENSMUSG00000020656ENSMUST00000020985ENSMUST00000085553ENSMUSG00000059669ENSMUST00000075954
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MN_0001ENSG00000115750ENST00000263663ENST00000416181ENST00000434858ENST00000480197ENSG00000134317ENST00000324907ENST00000405379ENST00000439493ENST00000464418ENST00000472167ENST00000480736ENST00000497403ENSG00000269973ENST00000602458CIL_0001MN_0002ENSMUSG00000020656ENSMUST00000020985ENSMUST00000085553ENSMUSG00000059669ENSMUST00000075954
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115750 ENST00000263663 1.715±0.00 1.292±0.00 0.340±0.00 1.186±0.00 2.154±0.75 1.573±0.71 0.397±0.21 3.885±0.00 0.706±0.00 1.929±0.27 1.207±0.00 1.357±0.67 1.750±0.55 3.114±2.78
ENST00000402170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.289±0.00 N/A N/A N/A
ENST00000434858 0.773±0.00 1.032±0.00 N/A 0.786±0.00 0.804±0.00 N/A N/A N/A N/A N/A N/A 0.712±0.00 N/A N/A
ENST00000469895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480197 N/A N/A N/A N/A 1.926±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134317 ENST00000324907 N/A 0.409±0.00 0.236±0.00 N/A 0.854±0.00 N/A 0.014±0.00 0.507±0.19 1.323±0.00 N/A 0.153±0.00 0.431±0.20 5.005±0.96 0.101±0.00
ENST00000405379 N/A N/A N/A 0.466±0.00 0.723±0.38 0.186±0.02 N/A N/A 0.735±0.00 N/A N/A 1.147±0.54 1.359±0.00 0.883±0.00
ENST00000439493 N/A N/A N/A N/A 1.019±0.00 N/A N/A 1.023±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464418 N/A N/A 0.130±0.00 0.085±0.00 N/A N/A N/A N/A N/A 0.934±0.15 N/A N/A N/A 0.303±0.00
ENST00000472167 N/A N/A N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.683±0.00 1.295±0.00 N/A
ENST00000480736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A
ENST00000494520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497403 N/A 0.066±0.00 0.110±0.00 0.028±0.00 N/A N/A 0.018±0.01 N/A 0.293±0.00 N/A 0.011±0.00 0.025±0.00 N/A 0.084±0.00
ENSG00000269973 ENST00000602458 0.489±0.00 1.411±0.00 0.097±0.00 0.475±0.19 0.639±0.31 0.345±0.07 0.206±0.14 0.744±0.54 0.242±0.07 0.418±0.17 0.256±0.01 0.678±0.46 0.546±0.10 0.882±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020656 ENSMUST00000020985 0.260±0.00 0.141±0.06 3.279±1.43 1.685±1.52 0.931±0.51 0.203±0.03 0.074±0.04 0.164±0.09 0.102±0.05 2.315±0.18 0.141±0.12 0.485±0.29 2.923±3.12 1.658±0.00
ENSMUST00000085553 0.635±0.25 0.280±0.16 6.398±1.30 0.792±0.00 1.710±0.67 0.299±0.06 0.114±0.03 0.316±0.09 0.148±0.10 1.462±0.21 0.127±0.02 0.574±0.23 2.605±1.78 1.925±0.98
ENSMUSG00000059669 ENSMUST00000075954 2.941±1.02 2.275±0.62 8.178±0.34 5.916±2.50 1.031±0.33 1.178±0.40 1.809±0.68 2.219±1.05 2.816±1.27 2.810±1.13 2.066±0.21 4.931±2.29 6.414±0.78 11.713±2.90

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