C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoredoxin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021204 Nxn-001 ENSMUSG00000020844 10090 - 11:76257198-76399140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021204 15.025±8.62 11.421±0.25 20.568±0.38 6.114±3.23 9.831±3.27 8.850±0.58 4.678±0.14 4.745±0.18 1.319±0.79 9.224±0.09 16.828±0.74 22.434±4.44 2.838±1.15 37.288±10.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AF CIL_0006AF_0003 CGP 11:76243715-76399140
CIL_0001Q9 CIL_0001Q9_0002 CGP 11:76257198-76416292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004791 IDA thioredoxin-disulfide reductase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0016055 IEA Wnt signaling pathway
GO:0030154 IEA cell differentiation
GO:0030178 IMP negative regulation of Wnt signaling pathway
GO:0031397 IMP negative regulation of protein ubiquitination
GO:0047134 IEA protein-disulfide reductase activity
GO:0055114 IEA oxidation-reduction process
GO:0072358 IMP cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336868 NXN-001 protein_coding Homo_sapiens 0 1982
ENST00000397383 NXNP1-001 processed_pseudogene Homo_sapiens 0 800
ENST00000537628 NXN-002 protein_coding Homo_sapiens 0 1408
ENST00000571080 NXN-012 retained_intron Homo_sapiens 0 206
ENST00000571281 NXN-007 retained_intron Homo_sapiens 0 531
ENST00000571684 NXN-003 protein_coding Homo_sapiens 0 531
ENST00000574018 NXN-008 processed_transcript Homo_sapiens 0 507
ENST00000575455 NXN-004 retained_intron Homo_sapiens 0 636
ENST00000575801 NXN-005 protein_coding Homo_sapiens 0 1423
ENST00000577098 NXN-010 processed_transcript Homo_sapiens 0 339

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