C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 59
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021239 Lrrc59-001 ENSMUSG00000020869 10090 + 11:94629767-94645216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021239 43.658±4.28 49.714±2.77 29.216±0.41 32.471±12.48 34.079±4.51 54.788±4.85 10.767±0.96 20.167±0.61 34.262±14.01 25.785±1.13 11.323±0.32 58.292±9.82 85.517±37.51 38.861±12.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042645 IEA mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225972 LRRC59-001 protein_coding Homo_sapiens 0 1668
ENST00000402043 RP3-407E4.4-001 unprocessed_pseudogene Homo_sapiens 0 544
ENST00000576448 LRRC59-002 protein_coding Homo_sapiens 0 206

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