C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021285 Stx8-001 ENSMUSG00000020903 10090 + 11:67966193-68207148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021285 1.317±0.43 0.278±0.10 2.516±0.88 1.146±0.46 0.787±0.31 1.020±0.17 0.827±0.02 1.435±0.14 0.703±0.30 1.420±0.28 2.207±0.22 0.986±0.73 1.726±0.51 4.789±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005765 IEA lysosomal membrane
GO:0006886 IBA intracellular protein transport
GO:0006906 IBA vesicle fusion
GO:0008333 IEA endosome to lysosome transport
GO:0016021 IBA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IBA SNARE complex
GO:0031625 IPI ubiquitin protein ligase binding
GO:0031902 IEA late endosome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306357 STX8-001 protein_coding Homo_sapiens 0 1099
ENST00000573016 STX8-004 protein_coding Homo_sapiens 0 527
ENST00000573373 STX8-002 processed_transcript Homo_sapiens 0 270
ENST00000574431 STX8-011 protein_coding Homo_sapiens 0 813
ENST00000575294 STX8-015 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000575858 STX8-012 nonsense_mediated_decay Homo_sapiens 0 586

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