C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020903 Stx8 10090 + 11:67966193-68207148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021285 Stx8-001 67966193-68207148 protein_coding
  ENSMUST00000021286 Stx8-003 67966469-67987607 protein_coding
  ENSMUST00000108675 Stx8-002 67966480-67974591 protein_coding
  ENSMUST00000129992 Stx8-005 67966490-68203770 processed_transcript
  ENSMUST00000142649 Stx8-004 67966506-67973641 processed_transcript
  ENSMUST00000148642 Stx8-006 67966492-67974464 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021285ENSMUST00000021286ENSMUST00000108675ENSMUST00000129992
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021285 1.317±0.43 0.278±0.10 2.516±0.88 1.146±0.46 0.787±0.31 1.020±0.17 0.827±0.02 1.435±0.14 0.703±0.30 1.420±0.28 2.207±0.22 0.986±0.73 1.726±0.51 4.789±0.22
ENSMUST00000021286 N/A 0.446±0.11 N/A 0.954±0.00 N/A 0.724±0.00 N/A N/A 0.764±0.35 N/A 0.883±0.00 0.882±0.44 1.537±0.50 0.651±0.00
ENSMUST00000108675 1.980±0.40 1.304±0.45 2.989±0.18 3.102±0.12 1.812±0.39 1.295±0.51 1.402±0.05 1.379±0.25 1.089±0.37 2.606±0.33 N/A 1.821±0.68 2.391±0.25 N/A
ENSMUST00000129992 4.177±0.50 1.075±0.00 22.859±1.06 13.190±6.91 4.625±2.68 3.898±0.33 3.641±0.42 7.182±2.27 6.238±2.63 5.045±1.28 10.944±1.76 26.643±11.17 26.324±9.80 24.797±11.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005765 IEA lysosomal membrane
GO:0006886 IBA intracellular protein transport
GO:0006906 IBA vesicle fusion
GO:0008333 IEA endosome to lysosome transport
GO:0016021 IBA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IBA SNARE complex
GO:0031625 IPI ubiquitin protein ligase binding
GO:0031902 IEA late endosome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041311 stx8 syntaxin 8 protein_coding Danio_rerio
ENSG00000170310 STX8 syntaxin 8 protein_coding Homo_sapiens

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