C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575858 STX8-012 ENSG00000170310 9606 - 17:9250472-9575835 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryENST00000575858
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary
ENST00000575858 5.634±0.00 7.570±0.00 0.715±0.00 8.290±0.00 7.164±0.00 5.587±0.00 7.857±0.00 5.349±0.00 10.673±0.00 1.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LN CIL_0001LN_0002 CGP 17:9021542-9576591
CIL_0003SO CIL_0003SO_0002 CGP 17:9250471-9643459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021285 Stx8-001 protein_coding Mus_musculus 0 586
ENSMUST00000129992 Stx8-005 processed_transcript Mus_musculus 0 496
ENSMUST00000021286 Stx8-003 protein_coding Mus_musculus 3.00004e-41 172
ENSMUST00000108675 Stx8-002 protein_coding Mus_musculus 1e-39 167
ENSMUST00000148642 Stx8-006 processed_transcript Mus_musculus 4e-35 152

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