C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021286 Stx8-003 ENSMUSG00000020903 10090 + 11:67966469-67987607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000021286
Transcript ID Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000021286 0.446±0.11 0.954±0.00 0.724±0.00 0.764±0.35 0.883±0.00 0.882±0.44 1.537±0.50 0.651±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0006886 IBA intracellular protein transport
GO:0006906 IBA vesicle fusion
GO:0016021 IBA integral component of membrane
GO:0031201 IBA SNARE complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306357 STX8-001 protein_coding Homo_sapiens 0 407
ENST00000573016 STX8-004 protein_coding Homo_sapiens 0 407
ENST00000573373 STX8-002 processed_transcript Homo_sapiens 0 270
ENST00000575294 STX8-015 nonsense_mediated_decay Homo_sapiens 1e-34 150
ENST00000575858 STX8-012 nonsense_mediated_decay Homo_sapiens 3.00004e-41 172

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