C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-myristoyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021314 Nmt1-001 ENSMUSG00000020936 10090 + 11:103028346-103068912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021314 17.564±5.37 12.283±1.00 15.525±5.73 18.621±7.79 13.664±3.90 9.303±2.39 9.059±1.75 11.169±3.05 11.886±4.25 8.787±3.19 11.807±1.55 15.049±2.80 24.787±5.64 12.949±4.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D7 CIL_0004D7_0003 CGP 11:102939264-103028333
CIL_0006U9 CIL_0006U9_0002 CGP 11:102994047-103068912
CIL_0004D8 CIL_0004D8_0003 CGP 11:103028190-103101658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0004379 TAS glycylpeptide N-tetradecanoyltransferase activity
GO:0005737 TAS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006499 IMP N-terminal protein myristoylation
GO:0015629 IEA actin cytoskeleton
GO:0018008 ISA N-terminal peptidyl-glycine N-myristoylation
GO:0019107 IEA myristoyltransferase activity
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258960 NMT1-201 protein_coding Homo_sapiens 0 2604
ENST00000543908 NMT1-003 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000585561 NMT1-006 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000587014 NMT1-004 retained_intron Homo_sapiens 0 422
ENST00000587120 NMT1-010 processed_transcript Homo_sapiens 0 261
ENST00000587670 NMT1-011 processed_transcript Homo_sapiens 0 239
ENST00000588455 NMT1-012 retained_intron Homo_sapiens 0 719
ENST00000588975 NMT1-002 processed_transcript Homo_sapiens 0 206
ENST00000590114 NMT1-005 processed_transcript Homo_sapiens 0 761
ENST00000590310 NMT1-008 retained_intron Homo_sapiens 0 584
ENST00000591931 NMT1-009 retained_intron Homo_sapiens 0 640
ENST00000592654 NMT1-007 protein_coding Homo_sapiens 0 409
ENST00000592782 NMT1-001 protein_coding Homo_sapiens 0 2638

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