C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021372 Atp5s-201 ENSMUSG00000054894 10090 + 12:69724962-69744658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021372 2.081±1.01 3.236±0.29 7.041±0.84 3.602±1.04 3.373±1.36 3.295±0.34 5.822±1.18 4.282±0.18 3.194±1.59 2.704±0.80 3.925±1.15 3.026±0.65 2.790±1.06 9.803±2.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HM CIL_0005HM_0003 CGP 12:69690436-69744658
CIL_0005HN CIL_0005HN_0003 CGP 12:69724962-69790707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006754 IEA ATP biosynthetic process
GO:0015992 IEA proton transport
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245448 ATP5S-002 protein_coding Homo_sapiens 0 270
ENST00000311459 ATP5S-003 protein_coding Homo_sapiens 0 688
ENST00000426751 ATP5S-004 protein_coding Homo_sapiens 0 270
ENST00000553774 ATP5S-009 retained_intron Homo_sapiens 0 241
ENST00000554204 ATP5S-001 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000554438 ATP5S-010 processed_transcript Homo_sapiens 0 691
ENST00000554951 ATP5S-005 processed_transcript Homo_sapiens 0 549
ENST00000555939 ATP5S-006 processed_transcript Homo_sapiens 0 475
ENST00000557421 ATP5S-008 processed_transcript Homo_sapiens 0 274

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