C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear RNA activating complex, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021532 Snapc1-201 ENSMUSG00000021113 10090 + 12:73964530-73984820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021532 1.104±0.25 1.799±0.86 3.965±0.06 5.615±0.53 2.224±0.37 1.468±0.82 1.339±0.78 1.460±0.48 1.559±0.79 2.136±0.57 1.980±0.36 4.102±3.61 11.465±8.68 2.662±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S0 CIL_0000S0_0002 CGP 12:73901375-73984820
CIL_0000S1 CIL_0000S1_0002 CGP 12:73964530-74267916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216294 SNAPC1-001 protein_coding Homo_sapiens 0 893

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