C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021558 Galnt16-201 ENSMUSG00000021130 10090 + 12:80518990-80603896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021558 6.297±2.87 3.015±0.28 5.592±0.90 10.807±4.97 4.526±1.90 1.386±0.14 1.274±0.37 0.325±0.05 0.040±0.04 1.426±0.24 1.080±0.23 3.032±1.13 1.107±0.94 0.448±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CI CIL_0002CI_0002 CGP 12:80463095-80603896
CIL_0006UI CIL_0006UI_0002 CGP 12:80518990-80644341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337827 GALNT16-002 protein_coding Homo_sapiens 0 2338
ENST00000448469 GALNT16-003 protein_coding Homo_sapiens 0 2490
ENST00000553471 GALNT16-001 nonsense_mediated_decay Homo_sapiens 0 2095
ENST00000553669 GALNT16-004 protein_coding Homo_sapiens 0 1989
ENST00000553740 GALNT16-005 processed_transcript Homo_sapiens 0 512
ENST00000554317 GALNT16-007 processed_transcript Homo_sapiens 0 553
ENST00000554858 GALNT16-008 processed_transcript Homo_sapiens 0 191
ENST00000555920 GALNT16-009 processed_transcript Homo_sapiens 0 651
ENST00000556829 GALNT16-010 processed_transcript Homo_sapiens 0 209

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