C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypeptide N-acetylgalactosaminyltransferase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553471 GALNT16-001 ENSG00000100626 9606 + 14:69260174-69354466 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverOvaryENST00000553471
Transcript ID Bladder Brain Heart Kidney Liver Ovary
ENST00000553471 0.177±0.00 0.251±0.00 0.438±0.00 0.878±0.00 0.177±0.13 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CI CIL_0002CI_0001 CGP 14:69191511-69357033
CIL_0006UI CIL_0006UI_0001 CGP 14:69259277-69398627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021558 Galnt16-201 protein_coding Mus_musculus 0 2095
ENSDART00000075186 galnt16-201 protein_coding Danio_rerio 0 595
ENSDART00000156460 galnt16-001 protein_coding Danio_rerio 0 595
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000002 60
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000008 58

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