C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100626-ENSG00000100632 CGP 9606 14:69259277-69398627
GeneTranscriptPositionBiotype
ENSG00000029364 (SLC39A9)
solute carrier family 39, member 9 		ENST00000031146 (SLC39A9-013) 69398692-69462381 protein_coding
ENST00000336643 (SLC39A9-009) 69398692-69460551 protein_coding
ENST00000538956 (SLC39A9-008) 69398390-69458827 retained_intron
ENST00000554023 (SLC39A9-012) 69454701-69458543 retained_intron
ENST00000554059 (SLC39A9-001) 69398708-69429457 retained_intron
ENST00000555245 (SLC39A9-003) 69398386-69459078 processed_transcript
ENST00000555840 (SLC39A9-005) 69398738-69462381 nonsense_mediated_decay
ENST00000556125 (SLC39A9-002) 69398015-69453300 processed_transcript
ENST00000556605 (SLC39A9-004) 69398690-69462388 protein_coding
ENST00000557046 (SLC39A9-010) 69399370-69458593 protein_coding
ENSG00000100626 (GALNT16)
polypeptide N-acetylgalactosaminyltransferase 16 		ENST00000337827 (GALNT16-002) 69259964-69357033 protein_coding
ENST00000448469 (GALNT16-003) 69260201-69352671 protein_coding
ENST00000553471 (GALNT16-001) 69260174-69354466 nonsense_mediated_decay
ENST00000553669 (GALNT16-004) 69260291-69348092 protein_coding
ENST00000553740 (GALNT16-005) 69298541-69326025 processed_transcript
ENST00000554317 (GALNT16-007) 69259642-69320843 processed_transcript
ENST00000554858 (GALNT16-008) 69259277-69260337 processed_transcript
ENST00000555920 (GALNT16-009) 69259642-69324742 processed_transcript
ENST00000556677 (GALNT16-006) 69332522-69339623 processed_transcript
ENST00000556829 (GALNT16-010) 69352029-69353968 processed_transcript
ENSG00000100632 (ERH)
enhancer of rudimentary homolog (Drosophila) 		ENST00000216520 (ERH-002) 69380135-69398271 processed_transcript
ENST00000555373 (ERH-003) 69386655-69398299 protein_coding
ENST00000557016 (ERH-001) 69380123-69398627 protein_coding
ENST00000557697 (ERH-004) 69380576-69394926 processed_transcript
ENSG00000280073 (CTD-2525P14.5)
 ENST00000624684 (CTD-2525P14.5-001) 69357010-69359308 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0006UI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021130-ENSMUSG00000021131 CGP 10090 12:80518990-80644341
GeneTranscriptPositionBiotype
ENSMUSG00000021130 (Galnt16)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 		ENSMUST00000021558 (Galnt16-201) 80518990-80603896 protein_coding
ENSMUSG00000021131 (Erh)
enhancer of rudimentary homolog (Drosophila) 		ENSMUST00000021559 (Erh-001) 80634022-80644341 protein_coding
ENSMUST00000166931 (Erh-002) 80634357-80643832 protein_coding
ENSMUSG00000048833 (Slc39a9)
solute carrier family 39 (zinc transporter), member 9 		ENSMUST00000085245 (Slc39a9-201) 80644215-80683341 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UI_0001ENSG00000029364ENST00000031146ENST00000336643ENST00000538956ENST00000554023ENST00000554059ENST00000555245ENST00000555840ENST00000556125ENST00000556605ENST00000557046ENSG00000100626ENST00000337827ENST00000448469ENST00000553471ENST00000553669ENST00000553740ENST00000554317ENST00000554858ENST00000555920ENST00000556677ENST00000556829ENSG00000100632ENST00000216520ENST00000555373ENST00000557016ENST00000557697ENSG00000280073ENST00000624684CIL_0006UI_0002ENSMUSG00000021130ENSMUST00000021558ENSMUSG00000021131ENSMUST00000021559ENSMUST00000166931ENSMUSG00000048833ENSMUST00000085245
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UI_0001ENSG00000029364ENST00000031146ENST00000336643ENST00000554059ENST00000556605ENSG00000100626ENST00000337827ENST00000448469ENST00000553471ENST00000553669ENST00000553740ENSG00000100632ENST00000216520ENST00000557016ENSG00000280073ENST00000624684CIL_0006UI_0002ENSMUSG00000021130ENSMUST00000021558ENSMUSG00000021131ENSMUST00000021559ENSMUST00000166931ENSMUSG00000048833ENSMUST00000085245
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000029364 ENST00000031146 4.158±0.00 N/A 4.085±0.00 4.596±0.15 2.416±0.00 3.880±1.48 1.853±0.00 N/A N/A 2.606±0.31 1.828±0.00 3.602±1.09 9.536±0.00 3.948±0.00
ENST00000336643 N/A N/A 3.331±0.00 2.559±0.00 N/A 10.634±0.00 2.283±0.00 8.154±0.00 4.404±0.00 6.222±0.00 N/A 4.960±0.00 N/A N/A
ENST00000538956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554059 N/A N/A 20.697±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.734±0.00 N/A N/A
ENST00000555245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556605 N/A 7.519±0.00 14.701±0.00 9.203±0.00 8.892±0.00 12.606±0.00 N/A 10.741±0.00 10.427±0.00 N/A 2.997±0.00 10.764±0.00 N/A N/A
ENST00000557046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100626 ENST00000337827 2.481±0.00 1.752±0.00 N/A 2.034±1.26 0.777±0.60 0.791±0.53 0.783±0.00 1.091±1.02 0.225±0.12 0.632±0.47 0.463±0.35 0.440±0.29 0.238±0.06 0.784±0.20
ENST00000448469 3.537±0.00 N/A 0.242±0.00 2.869±1.21 5.449±0.00 N/A 4.348±2.37 4.461±0.00 N/A 1.321±0.00 0.735±0.00 1.159±0.00 0.284±0.00 2.263±0.01
ENST00000553471 N/A N/A 0.177±0.00 0.251±0.00 N/A N/A 0.438±0.00 0.878±0.00 0.177±0.13 N/A N/A 0.058±0.00 N/A N/A
ENST00000553669 3.274±0.00 N/A 0.521±0.00 4.318±3.28 0.961±0.00 2.419±0.00 N/A N/A 1.689±0.00 0.351±0.00 N/A 0.866±0.60 0.280±0.00 N/A
ENST00000553740 N/A N/A N/A N/A N/A 2.427±0.00 6.581±0.00 1.196±0.00 N/A 1.190±0.00 N/A 0.258±0.00 N/A N/A
ENST00000554317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100632 ENST00000216520 28.294±0.00 43.918±0.00 N/A 34.247±0.00 27.380±0.00 31.194±0.00 22.410±0.00 41.843±0.00 46.488±0.00 40.101±0.00 25.397±0.00 53.325±12.30 58.910±12.60 48.057±3.95
ENST00000555373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557016 22.896±0.00 26.770±0.00 N/A 20.935±5.53 14.569±0.07 22.943±0.00 8.435±0.84 14.295±2.07 9.374±0.00 11.003±0.63 7.070±1.16 37.820±31.60 22.631±6.71 24.769±11.13
ENST00000557697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280073 ENST00000624684 N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A 0.260±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021130 ENSMUST00000021558 6.297±2.87 3.015±0.28 5.592±0.90 10.807±4.97 4.526±1.90 1.386±0.14 1.274±0.37 0.325±0.05 0.040±0.04 1.426±0.24 1.080±0.23 3.032±1.13 1.107±0.94 0.448±0.18
ENSMUSG00000021131 ENSMUST00000021559 15.689±4.29 N/A 47.299±4.71 51.029±31.27 N/A N/A 7.713±0.57 12.724±0.14 75.105±25.95 N/A 10.340±3.49 25.097±10.96 48.279±23.07 16.813±2.84
ENSMUST00000166931 N/A N/A N/A 60.166±0.00 N/A N/A N/A N/A 69.912±34.11 N/A N/A N/A 54.280±11.49 N/A
ENSMUSG00000048833 ENSMUST00000085245 17.242±3.70 21.506±5.11 14.076±0.10 8.823±2.74 17.003±5.52 40.010±7.81 7.533±0.51 21.054±2.57 14.000±5.21 23.567±4.40 2.331±0.28 23.334±8.00 8.911±2.22 4.101±1.62

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