C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021645 Dcaf4-201 ENSMUSG00000021222 10090 + 12:83520466-83541988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021645
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021645 11.662±1.27 12.341±5.67 7.006±0.31 12.138±2.83 9.556±2.50 7.080±1.21 6.299±0.77 3.595±0.88 4.499±3.50 4.148±1.24 8.708±1.82 15.400±4.23 13.236±5.14 3.706±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033C CIL_00033C_0002 CGP 12:83213745-83541988
CIL_0008P0 CIL_0008P0_0002 VISTA 12:83418739-84022790
CIL_0000UK CIL_0000UK_0002 CGP 12:83520466-83597147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319675 DCAF4L2-001 protein_coding Homo_sapiens 0 798
ENST00000353777 DCAF4-004 protein_coding Homo_sapiens 0 534
ENST00000358377 DCAF4-001 protein_coding Homo_sapiens 0 1378
ENST00000394234 DCAF4-003 protein_coding Homo_sapiens 0 1378
ENST00000509153 DCAF4-005 protein_coding Homo_sapiens 0 1046
ENST00000509320 DCAF4-002 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000553457 DCAF4-014 protein_coding Homo_sapiens 0 1151
ENST00000555042 DCAF4-013 protein_coding Homo_sapiens 0 1284

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