C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205683-ENSG00000119599 CGP 9606 14:72619296-72959703
GeneTranscriptPositionBiotype
ENSG00000119599 (DCAF4)
DDB1 and CUL4 associated factor 4 		ENST00000353777 (DCAF4-004) 72926377-72959592 protein_coding
ENST00000358377 (DCAF4-001) 72926332-72959121 protein_coding
ENST00000394234 (DCAF4-003) 72926478-72959703 protein_coding
ENST00000505361 (DCAF4-007) 72926501-72941902 retained_intron
ENST00000508412 (DCAF4-009) 72926785-72941784 processed_transcript
ENST00000509153 (DCAF4-005) 72926480-72958946 protein_coding
ENST00000509320 (DCAF4-002) 72926451-72959121 nonsense_mediated_decay
ENST00000510612 (DCAF4-008) 72926777-72940281 processed_transcript
ENST00000513337 (DCAF4-011) 72941909-72945927 processed_transcript
ENST00000514191 (DCAF4-006) 72926499-72940526 retained_intron
ENST00000514486 (DCAF4-010) 72929700-72941824 processed_transcript
ENST00000553457 (DCAF4-014) 72937989-72958112 protein_coding
ENST00000555042 (DCAF4-013) 72926487-72959644 protein_coding
ENST00000555992 (DCAF4-015) 72958715-72959375 processed_transcript
ENST00000557203 (DCAF4-016) 72942719-72946029 retained_intron
ENSG00000205683 (DPF3)
D4, zinc and double PHD fingers, family 3 		ENST00000366353 (DPF3-005) 72661876-72892649 nonsense_mediated_decay
ENST00000381216 (DPF3-002) 72661876-72894101 nonsense_mediated_decay
ENST00000541685 (DPF3-201) 72661043-72894116 protein_coding
ENST00000546183 (DPF3-001) 72670853-72894101 protein_coding
ENST00000553608 (DPF3-014) 72723632-72742711 processed_transcript
ENST00000554594 (DPF3-013) 72674022-72714504 processed_transcript
ENST00000555469 (DPF3-008) 72806010-72836483 processed_transcript
ENST00000555781 (DPF3-009) 72723632-72731667 processed_transcript
ENST00000556238 (DPF3-010) 72671311-72723771 processed_transcript
ENST00000556509 (DPF3-004) 72619296-72894088 protein_coding
ENST00000556891 (DPF3-011) 72671000-72679302 processed_transcript
ENST00000556902 (DPF3-007) 72771744-72836483 processed_transcript
ENST00000556997 (DPF3-012) 72671311-72675771 processed_transcript
ENST00000557704 (DPF3-006) 72661049-72724105 processed_transcript
ENST00000610283 (DPF3-202) 72661043-72892649 protein_coding
ENST00000614862 (DPF3-203) 72661043-72894116 protein_coding
ENSG00000206751 (Y_RNA)
Y RNA 		ENST00000384024 (Y_RNA.1-619) 72853224-72853331 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00033C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021221-ENSMUSG00000021222 CGP 10090 12:83213745-83541988
GeneTranscriptPositionBiotype
ENSMUSG00000021222 (Dcaf4)
DDB1 and CUL4 associated factor 4 		ENSMUST00000021645 (Dcaf4-201) 83520466-83541988 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033C_0001ENSG00000119599ENST00000353777ENST00000358377ENST00000394234ENST00000505361ENST00000508412ENST00000509153ENST00000509320ENST00000510612ENST00000513337ENST00000514191ENST00000514486ENST00000553457ENST00000555042ENST00000555992ENST00000557203ENSG00000205683ENST00000366353ENST00000381216ENST00000541685ENST00000546183ENST00000553608ENST00000554594ENST00000555469ENST00000555781ENST00000556238ENST00000556509ENST00000556891ENST00000556902ENST00000556997ENST00000557704ENST00000610283ENST00000614862ENSG00000206751ENST00000384024CIL_00033C_0002ENSMUSG00000021222ENSMUST00000021645
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033C_0001ENSG00000119599ENST00000353777ENST00000358377ENST00000394234ENST00000508412ENST00000509153ENST00000509320ENST00000514486ENST00000553457ENST00000555042ENST00000555992ENSG00000205683ENST00000366353ENST00000381216ENST00000541685ENST00000546183ENST00000554594ENST00000555781ENST00000556238ENST00000556509ENST00000557704ENSG00000206751ENST00000384024CIL_00033C_0002ENSMUSG00000021222ENSMUST00000021645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119599 ENST00000353777 N/A 1.215±0.00 N/A N/A N/A N/A N/A 1.170±0.20 0.639±0.00 1.438±0.00 N/A 1.667±0.00 2.071±0.00 1.512±0.00
ENST00000358377 N/A N/A N/A N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.760±0.00 N/A 1.695±0.00
ENST00000394234 0.551±0.00 1.829±0.00 N/A 1.980±0.54 1.303±0.00 0.317±0.00 0.527±0.00 0.605±0.20 0.845±0.29 N/A 1.553±0.00 3.825±1.37 3.791±1.37 1.867±0.50
ENST00000505361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.904±0.00
ENST00000509153 N/A N/A N/A N/A N/A N/A 0.421±0.07 N/A N/A N/A N/A 0.574±0.00 N/A N/A
ENST00000509320 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 0.396±0.00 0.459±0.00 N/A 1.667±0.00 N/A
ENST00000510612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514486 N/A N/A 2.269±0.00 3.760±0.00 2.373±0.00 1.949±0.00 N/A N/A N/A N/A N/A 1.975±0.00 N/A N/A
ENST00000553457 N/A 0.969±0.00 N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555042 1.850±0.00 3.433±0.00 0.369±0.00 1.137±0.33 1.971±0.00 0.981±0.22 N/A 2.784±0.00 0.459±0.00 0.689±0.00 1.376±0.00 2.776±1.90 2.102±0.75 3.571±0.00
ENST00000555992 N/A N/A 1.326±0.00 N/A 2.855±0.00 1.483±0.00 N/A N/A N/A N/A 1.760±0.00 2.520±0.00 N/A 4.547±0.00
ENST00000557203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205683 ENST00000366353 N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000381216 0.025±0.00 0.161±0.00 0.871±0.00 0.746±0.00 0.075±0.00 N/A 1.226±0.00 0.418±0.00 0.125±0.02 0.111±0.00 N/A 0.482±0.45 0.071±0.00 0.756±0.03
ENST00000541685 0.017±0.00 0.113±0.00 N/A 0.943±0.68 0.402±0.00 0.256±0.00 3.409±0.00 0.584±0.00 0.276±0.00 0.087±0.00 4.580±0.00 2.905±0.44 0.161±0.03 N/A
ENST00000546183 N/A N/A N/A N/A N/A 0.250±0.00 1.340±0.00 N/A N/A 0.152±0.00 N/A N/A N/A 2.440±0.00
ENST00000553608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00 N/A
ENST00000555469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.320±0.00
ENST00000556238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.971±0.00
ENST00000556509 N/A N/A N/A 1.517±0.77 N/A 1.089±0.00 N/A N/A N/A 0.040±0.00 1.984±0.00 N/A 0.292±0.00 3.596±0.00
ENST00000556891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557704 N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A
ENST00000610283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206751 ENST00000384024 N/A 0.496±0.00 N/A N/A N/A N/A 1.613±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021222 ENSMUST00000021645 11.662±1.27 12.341±5.67 7.006±0.31 12.138±2.83 9.556±2.50 7.080±1.21 6.299±0.77 3.595±0.88 4.499±3.50 4.148±1.24 8.708±1.82 15.400±4.23 13.236±5.14 3.706±0.82

Loading