C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 193, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021957 Fam193b-201 ENSMUSG00000021495 10090 - 13:55539319-55571120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021957 14.877±2.75 21.415±10.92 22.635±5.20 32.707±5.62 23.790±3.71 19.105±2.26 5.563±1.58 17.229±3.91 9.378±4.17 16.221±2.73 2.825±1.16 23.672±6.13 5.710±0.93 4.764±1.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0009AP CIL_0009AP_0002 VISTA 13:55516415-56118354
CIL_0002YP CIL_0002YP_0002 CGP 13:55530410-55571120
CIL_0002YQ CIL_0002YQ_0002 CGP 13:55539319-55597663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000502403 FAM193B-014 protein_coding Homo_sapiens 0 529
ENST00000504130 FAM193B-009 processed_transcript Homo_sapiens 0 261
ENST00000505241 FAM193B-008 processed_transcript Homo_sapiens 0 359
ENST00000505569 FAM193B-006 retained_intron Homo_sapiens 0 1325
ENST00000506064 FAM193B-012 processed_transcript Homo_sapiens 0 302
ENST00000506432 FAM193B-019 protein_coding Homo_sapiens 0 688
ENST00000506879 FAM193B-017 retained_intron Homo_sapiens 0 272
ENST00000506955 FAM193B-001 nonsense_mediated_decay Homo_sapiens 0 1722
ENST00000507212 FAM193B-007 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000507587 FAM193B-016 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000508298 FAM193B-018 processed_transcript Homo_sapiens 0 198
ENST00000510163 FAM193B-005 nonsense_mediated_decay Homo_sapiens 0 1722
ENST00000510429 FAM193B-015 protein_coding Homo_sapiens 0 512
ENST00000510479 FAM193B-002 nonsense_mediated_decay Homo_sapiens 0 1722
ENST00000513282 FAM193B-010 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000513502 FAM193B-011 retained_intron Homo_sapiens 0 577
ENST00000514747 FAM193B-003 protein_coding Homo_sapiens 0 1323
ENST00000515394 FAM193B-013 retained_intron Homo_sapiens 0 619
ENST00000524677 FAM193B-004 protein_coding Homo_sapiens 0 1849

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