C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002YQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146067-ENSG00000184840 CGP 9606 5:177519788-177596124
GeneTranscriptPositionBiotype
ENSG00000184840 (TMED9)
transmembrane emp24 protein transport domain containing 9 		ENST00000332598 (TMED9-001) 177592158-177596124 protein_coding
ENST00000505521 (TMED9-003) 177592217-177594115 retained_intron
ENST00000507578 (TMED9-005) 177592650-177594195 processed_transcript
ENST00000507723 (TMED9-002) 177592272-177595420 retained_intron
ENST00000510499 (TMED9-006) 177593222-177595386 retained_intron
ENST00000513799 (TMED9-004) 177592488-177595577 retained_intron
ENSG00000272459 (RP11-1277A3.3)
 ENST00000606358 (RP11-1277A3.3-001) 177554824-177555364 lincRNA
CIL_0002YQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021495-ENSMUSG00000058569 CGP 10090 13:55539319-55597663
GeneTranscriptPositionBiotype
ENSMUSG00000021495 (Fam193b)
family with sequence similarity 193, member B 		ENSMUST00000021957 (Fam193b-201) 55539319-55571120 protein_coding
ENSMUSG00000058569 (Tmed9)
transmembrane emp24 protein transport domain containing 9 		ENSMUST00000109905 (Tmed9-201) 55593135-55597663 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YQ_0001ENSG00000184840ENST00000332598ENST00000505521ENST00000507578ENST00000507723ENST00000510499ENST00000513799ENSG00000272459ENST00000606358CIL_0002YQ_0002ENSMUSG00000021495ENSMUST00000021957ENSMUSG00000058569ENSMUST00000109905
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YQ_0001ENSG00000184840ENST00000332598ENST00000505521ENST00000513799ENSG00000272459ENST00000606358CIL_0002YQ_0002ENSMUSG00000021495ENSMUST00000021957ENSMUSG00000058569ENSMUST00000109905
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184840 ENST00000332598 52.581±0.00 68.788±0.00 10.462±0.00 16.323±6.24 30.384±10.17 30.631±11.24 16.208±10.69 52.650±37.00 78.903±72.17 54.494±44.43 16.085±9.79 51.395±29.99 197.331±30.61 42.425±4.99
ENST00000505521 N/A N/A N/A 3.225±0.00 N/A N/A 2.879±0.00 N/A N/A N/A 6.373±0.00 N/A N/A N/A
ENST00000507578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513799 23.676±0.00 25.098±0.00 N/A N/A 24.368±0.00 16.002±0.00 N/A 30.533±0.00 N/A N/A N/A N/A N/A 19.691±0.00
ENSG00000272459 ENST00000606358 0.093±0.00 0.229±0.00 N/A 1.102±0.96 0.260±0.00 0.082±0.00 0.068±0.00 0.136±0.00 0.061±0.00 N/A 0.319±0.11 0.204±0.05 0.210±0.12 0.341±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021495 ENSMUST00000021957 14.877±2.75 21.415±10.92 22.635±5.20 32.707±5.62 23.790±3.71 19.105±2.26 5.563±1.58 17.229±3.91 9.378±4.17 16.221±2.73 2.825±1.16 23.672±6.13 5.710±0.93 4.764±1.80
ENSMUSG00000058569 ENSMUST00000109905 50.882±8.80 44.258±3.75 76.495±7.33 40.962±3.48 25.178±7.99 44.258±4.69 31.481±1.19 41.104±4.29 40.477±13.27 40.878±2.10 28.133±4.13 56.514±11.54 92.130±22.60 16.786±5.72

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