C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022119 Atg10-201 ENSMUSG00000021619 10090 - 13:90935349-91223987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022119 4.041±0.90 1.039±0.35 4.391±0.78 1.807±0.30 2.287±1.40 1.115±0.23 4.848±0.50 4.317±0.46 1.176±0.32 2.123±0.55 2.028±0.66 1.408±1.07 1.832±0.55 0.528±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000922 CIL_000922_0002 VISTA 13:90886994-91490170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IBA intracellular
GO:0005737 IEA cytoplasm
GO:0006497 IDA protein lipidation
GO:0006914 IBA autophagy
GO:0015031 IEA protein transport
GO:0019777 IMP Atg12 ligase activity
GO:0031401 IDA positive regulation of protein modification process
GO:0032446 IBA protein modification by small protein conjugation
GO:0034263 IEA autophagy in response to ER overload

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282185 ATG10-001 protein_coding Homo_sapiens 0 616
ENST00000458350 ATG10-012 protein_coding Homo_sapiens 0 601
ENST00000504770 ATG10-007 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000513634 ATG10-008 protein_coding Homo_sapiens 0 499
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 0 213

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