C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514253 ATG10-009 ENSG00000152348 9606 + 5:82164445-82276857 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TK CIL_0005TK_0002 CGP 5:81413021-82276857
CIL_000922 CIL_000922_0001 VISTA 5:81723063-82325864

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022119 Atg10-201 protein_coding Mus_musculus 0 213
ENSMUST00000099128 Gm5148-003 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000108105 Gm5148-002 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000079755 Gm5148-001 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000116115 Rps23-ps-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000051955 Rps23-201 protein_coding Mus_musculus 2.99878e-43 180
ENSMUST00000086479 C330021F23Rik-201 protein_coding Mus_musculus 3.00018e-42 176
ENSMUST00000136592 C330021F23Rik-001 protein_coding Mus_musculus 3.00018e-42 176
ENSMUST00000146939 Rps23-ps2-001 processed_pseudogene Mus_musculus 9.99967e-42 174
ENSMUST00000098864 Gm10689-201 processed_pseudogene Mus_musculus 9.99967e-42 174
ENSMUST00000151633 C330021F23Rik-002 protein_coding Mus_musculus 9.99967e-42 174
ENSMUST00000118083 Gm8624-001 transcribed_processed_pseudogene Mus_musculus 3e-37 159
ENSMUST00000165677 Gm8624-002 processed_transcript Mus_musculus 3e-37 159

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