C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000922_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1432 VISTA 9606 5:81723063-82325864
GeneTranscriptPositionBiotype
ENSG00000145687 (SSBP2)
single-stranded DNA binding protein 2 		ENST00000320672 (SSBP2-001) 81413021-81751253 protein_coding
ENST00000504136 (SSBP2-015) 81420435-81443273 retained_intron
ENST00000504174 (SSBP2-010) 81467017-81750901 processed_transcript
ENST00000504985 (SSBP2-008) 81419936-81513717 protein_coding
ENST00000505980 (SSBP2-007) 81420014-81751047 protein_coding
ENST00000506960 (SSBP2-014) 81615056-81751028 retained_intron
ENST00000507472 (SSBP2-017) 81466973-81751120 processed_transcript
ENST00000507655 (SSBP2-012) 81446869-81751797 processed_transcript
ENST00000507968 (SSBP2-018) 81615486-81616585 processed_transcript
ENST00000508912 (SSBP2-016) 81636472-81751016 retained_intron
ENST00000509013 (SSBP2-013) 81466974-81751022 protein_coding
ENST00000509053 (SSBP2-006) 81419873-81751048 protein_coding
ENST00000509743 (SSBP2-019) 81442651-81616473 processed_transcript
ENST00000510060 (SSBP2-021) 81419979-81448063 processed_transcript
ENST00000512098 (SSBP2-011) 81473700-81750757 processed_transcript
ENST00000512923 (SSBP2-009) 81419963-81513717 protein_coding
ENST00000513785 (SSBP2-020) 81420288-81437830 retained_intron
ENST00000514493 (SSBP2-003) 81419918-81751250 protein_coding
ENST00000515395 (SSBP2-004) 81420181-81751097 protein_coding
ENST00000615665 (SSBP2-201) 81417360-81751253 protein_coding
ENST00000622130 (SSBP2-202) 81419935-81751086 protein_coding
ENSG00000186468 (RPS23)
ribosomal protein S23 		ENST00000296674 (RPS23-001) 82273358-82278577 protein_coding
ENST00000503605 (RPS23-003) 82276155-82278143 processed_transcript
ENST00000504293 (RPS23-004) 82276060-82277951 retained_intron
ENST00000507980 (RPS23-006) 82275878-82278354 protein_coding
ENST00000510019 (RPS23-005) 82275421-82278396 protein_coding
ENST00000510210 (RPS23-008) 82274524-82278341 protein_coding
ENST00000511844 (RPS23-002) 82277359-82278355 protein_coding
ENST00000512493 (RPS23-007) 82275244-82278351 protein_coding
ENSG00000205464 (ATP6AP1L)
ATPase, H+ transporting, lysosomal accessory protein 1-like 		ENST00000380167 (ATP6AP1L-001) 82279462-82318803 protein_coding
ENST00000439350 (ATP6AP1L-201) 82305347-82318328 protein_coding
ENST00000502523 (ATP6AP1L-005) 82382945-82386516 processed_transcript
ENST00000508366 (ATP6AP1L-002) 82308859-82386977 processed_transcript
ENST00000514672 (ATP6AP1L-004) 82310036-82318380 retained_intron
ENSG00000214857 (SHFM1P1)
split hand/foot malformation (ectrodactyly) type 1 pseudogene 1 		ENST00000506694 (SHFM1P1-001) 81892490-81892721 processed_pseudogene
ENSG00000236447 (ATG10-IT1)
ATG10 intronic transcript 1 (non-protein coding) 		ENST00000396880 (ATG10-IT1-001) 81991995-81992481 sense_intronic
ENSG00000248192 (ATG10-AS1)
ATG10 antisense RNA 1 		ENST00000504846 (ATG10-AS1-001) 82073055-82073702 antisense
ENSG00000249483 (CTD-2249K22.1)
 ENST00000512859 (CTD-2249K22.1-001) 81851601-81852201 lincRNA
ENSG00000251374 (RPS23P5)
 ENST00000510378 (RPS23P5-001) 82265157-82265259 processed_pseudogene
ENSG00000251495 (PPIAP11)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 11 		ENST00000510729 (PPIAP11-001) 82009602-82010094 processed_pseudogene
ENSG00000265684 (RN7SL378P)
RNA, 7SL, cytoplasmic 378, pseudogene 		ENST00000582657 (RN7SL378P-201) 82078427-82078724 misc_RNA
CIL_000922_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1432 VISTA 10090 13:90886994-91490170
GeneTranscriptPositionBiotype
ENSMUSG00000003992 (Ssbp2)
single-stranded DNA binding protein 2 		ENSMUST00000004094 (Ssbp2-001) 91461050-91703429 protein_coding
ENSMUST00000042122 (Ssbp2-004) 91461091-91701236 protein_coding
ENSMUST00000133984 (Ssbp2-006) 91539343-91657776 processed_transcript
ENSMUST00000137493 (Ssbp2-003) 91461160-91672408 retained_intron
ENSMUST00000137658 (Ssbp2-009) 91670437-91691432 retained_intron
ENSMUST00000138488 (Ssbp2-007) 91461127-91539399 nonsense_mediated_decay
ENSMUST00000141381 (Ssbp2-005) 91461181-91524866 retained_intron
ENSMUST00000144659 (Ssbp2-002) 91461163-91565210 retained_intron
ENSMUST00000156547 (Ssbp2-008) 91460283-91688866 processed_transcript
ENSMUSG00000021619 (Atg10)
autophagy related 10 		ENSMUST00000022119 (Atg10-201) 90935349-91223987 protein_coding
ENSMUSG00000049517 (Rps23)
ribosomal protein S23 		ENSMUST00000051955 (Rps23-201) 90923131-90924942 protein_coding
ENSMUSG00000078958 (Atp6ap1l)
ATPase, H+ transporting, lysosomal accessory protein 1-like 		ENSMUST00000109541 (Atp6ap1l-001) 90883439-90905355 protein_coding
ENSMUST00000182104 (Atp6ap1l-005) 90883453-90898824 protein_coding
ENSMUST00000182446 (Atp6ap1l-003) 90883439-90905307 nonsense_mediated_decay
ENSMUST00000182932 (Atp6ap1l-002) 90898756-90905335 processed_transcript
ENSMUST00000183162 (Atp6ap1l-004) 90883433-90899813 protein_coding
ENSMUSG00000091419 (Gm17450)
predicted gene, 17450 		ENSMUST00000164671 (Gm17450-201) 91220452-91220878 pseudogene
ENSMUSG00000097182 (A830009L08Rik)
RIKEN cDNA A830009L08 gene 		ENSMUST00000181054 (A830009L08Rik-001) 91368990-91388085 lincRNA
ENSMUSG00000099340 (RP23-241P22.2)
predicted gene 29540 		ENSMUST00000188207 (RP23-241P22.2-001) 91373842-91374294 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000922_0001ENSG00000145687ENST00000320672ENST00000504985ENST00000505980ENST00000507968ENST00000508912ENST00000510060ENST00000514493ENST00000515395ENST00000615665ENST00000622130ENSG00000186468ENST00000296674ENST00000504293ENST00000507980ENST00000510019ENST00000512493ENSG00000205464ENST00000380167ENST00000439350ENST00000502523ENST00000508366ENST00000514672ENSG00000214857ENST00000506694ENSG00000236447ENST00000396880ENSG00000248192ENST00000504846ENSG00000249483ENST00000512859ENSG00000251374ENST00000510378ENSG00000251495ENST00000510729ENSG00000265684ENST00000582657CIL_000922_0002ENSMUSG00000003992ENSMUST00000004094ENSMUST00000042122ENSMUST00000133984ENSMUST00000156547ENSMUSG00000021619ENSMUST00000022119ENSMUSG00000049517ENSMUST00000051955ENSMUSG00000078958ENSMUST00000109541ENSMUST00000182104ENSMUST00000182446ENSMUSG00000091419ENSMUST00000164671ENSMUSG00000097182ENSMUST00000181054ENSMUSG00000099340ENSMUST00000188207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145687 ENST00000320672 0.480±0.00 N/A 0.768±0.00 1.512±0.65 0.923±0.15 1.288±0.58 0.649±0.00 0.358±0.30 N/A 0.879±0.34 N/A 1.574±1.27 0.248±0.01 0.389±0.12
ENST00000504136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504985 N/A N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A N/A N/A N/A 1.192±0.35 N/A
ENST00000505980 N/A N/A N/A N/A N/A N/A 2.471±0.00 N/A N/A 3.620±0.00 3.046±0.00 2.389±1.41 1.908±0.39 4.643±0.00
ENST00000506960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507968 N/A N/A 10.778±0.00 N/A 10.965±0.00 14.943±0.00 13.711±0.00 7.714±0.00 29.652±0.00 19.610±0.00 5.057±0.00 18.659±0.00 N/A N/A
ENST00000508912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.612±0.00 N/A N/A N/A
ENST00000509013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.464±0.00 1.230±0.00 N/A
ENST00000512098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.166±0.00 N/A
ENST00000515395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.689±0.00 N/A N/A N/A
ENST00000615665 N/A N/A N/A 1.938±0.00 1.685±0.00 1.328±0.00 0.387±0.00 N/A 2.895±0.00 3.444±0.00 0.246±0.00 0.873±0.00 N/A N/A
ENST00000622130 6.069±0.00 2.728±0.00 N/A 4.912±0.72 3.941±2.55 8.761±0.00 6.386±0.00 6.237±0.00 0.900±0.00 5.233±0.00 2.145±0.00 11.253±2.35 4.898±0.20 9.989±0.00
ENSG00000186468 ENST00000296674 11.212±0.00 16.413±0.00 6.580±0.00 21.047±1.15 7.746±0.00 19.459±9.05 7.945±1.38 12.882±6.29 20.637±0.00 9.495±0.00 7.628±0.00 9.768±0.00 N/A 9.110±3.11
ENST00000503605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504293 124.928±0.00 N/A N/A N/A 46.697±6.66 28.453±0.00 47.720±35.88 52.204±23.73 89.364±0.00 110.208±93.24 127.440±110.27 334.109±254.08 389.910±106.45 81.354±33.57
ENST00000507980 49.073±0.00 141.819±0.00 N/A 36.784±0.00 79.887±0.00 88.838±0.00 N/A N/A N/A N/A N/A N/A N/A 45.864±0.00
ENST00000510019 49.580±0.00 63.295±0.00 N/A 33.041±0.00 26.113±0.00 95.147±0.00 25.207±0.00 28.733±0.00 20.396±0.00 41.159±0.00 66.580±0.00 132.142±30.60 61.290±14.51 48.921±0.00
ENST00000510210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512493 107.014±0.00 235.133±0.00 44.119±0.00 95.400±29.69 79.093±13.91 263.894±194.56 106.384±69.90 127.014±62.12 149.190±38.02 352.794±280.49 408.576±310.22 574.261±623.32 422.575±228.46 130.794±44.24
ENSG00000205464 ENST00000380167 0.494±0.00 0.517±0.00 0.443±0.00 1.216±0.00 0.250±0.14 0.139±0.11 0.196±0.17 0.501±0.00 0.180±0.07 0.440±0.00 0.404±0.00 1.331±0.00 0.583±0.00 0.826±0.00
ENST00000439350 N/A 0.628±0.00 N/A N/A N/A 0.308±0.00 0.534±0.25 N/A 0.482±0.00 1.098±0.00 0.620±0.41 0.930±0.19 0.673±0.17 1.602±0.00
ENST00000502523 N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 0.590±0.00 N/A N/A N/A N/A
ENST00000508366 0.140±0.00 0.191±0.00 N/A N/A 0.180±0.05 0.078±0.00 0.039±0.00 0.281±0.00 0.030±0.00 0.147±0.00 0.055±0.00 0.213±0.06 N/A 0.150±0.00
ENST00000514672 N/A N/A N/A N/A 1.106±0.00 0.810±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214857 ENST00000506694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.90 N/A N/A
ENSG00000236447 ENST00000396880 0.157±0.00 0.239±0.00 0.220±0.00 0.214±0.00 0.134±0.00 0.021±0.00 0.091±0.00 0.069±0.00 1.142±0.00 0.053±0.00 N/A 0.090±0.00 N/A 0.173±0.01
ENSG00000248192 ENST00000504846 N/A N/A 1.676±0.00 0.153±0.00 0.178±0.00 2.031±0.00 N/A N/A 2.489±0.00 1.240±0.00 N/A 0.066±0.02 N/A 0.058±0.00
ENSG00000249483 ENST00000512859 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251374 ENST00000510378 N/A 0.614±0.00 N/A 0.401±0.00 N/A N/A N/A 0.983±0.00 N/A N/A N/A N/A 0.847±0.00 0.761±0.00
ENSG00000251495 ENST00000510729 0.151±0.00 0.158±0.00 N/A 0.260±0.04 0.902±0.71 0.158±0.07 0.079±0.01 0.411±0.00 0.129±0.01 1.388±0.00 0.028±0.00 0.250±0.14 0.697±0.18 0.058±0.00
ENSG00000265684 ENST00000582657 0.162±0.00 0.224±0.00 0.342±0.00 0.417±0.00 0.154±0.10 0.262±0.00 N/A 0.057±0.00 0.253±0.00 0.054±0.00 N/A 0.277±0.00 N/A 0.153±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003992 ENSMUST00000004094 N/A N/A N/A 2.762±0.00 N/A N/A N/A N/A N/A N/A 0.442±0.08 N/A N/A N/A
ENSMUST00000042122 9.548±3.45 1.742±0.23 32.967±0.16 39.233±8.18 7.497±4.48 3.160±0.60 6.754±0.74 9.670±0.40 18.144±6.83 5.948±0.64 5.373±0.67 10.653±3.81 3.180±1.29 2.815±0.31
ENSMUST00000133984 N/A N/A N/A 36.846±0.00 N/A N/A N/A N/A N/A N/A N/A 20.949±0.00 6.751±5.10 11.209±11.45
ENSMUST00000137493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156547 9.864±5.02 5.124±1.07 22.897±1.14 20.295±6.90 7.822±0.45 6.054±0.96 N/A N/A 15.800±3.57 5.947±0.76 3.225±0.46 15.124±2.02 N/A 2.755±0.35
ENSMUSG00000021619 ENSMUST00000022119 4.041±0.90 1.039±0.35 4.391±0.78 1.807±0.30 2.287±1.40 1.115±0.23 4.848±0.50 4.317±0.46 1.176±0.32 2.123±0.55 2.028±0.66 1.408±1.07 1.832±0.55 0.528±0.25
ENSMUSG00000049517 ENSMUST00000051955 243.768±101.25 46.148±6.52 759.284±273.24 334.905±197.12 186.405±72.88 273.131±50.84 100.537±13.40 236.827±15.80 520.106±473.63 253.492±37.01 126.043±33.41 320.613±90.33 437.035±270.25 164.288±34.15
ENSMUSG00000078958 ENSMUST00000109541 N/A N/A N/A 1.900±2.22 N/A N/A N/A N/A N/A N/A N/A 0.537±0.13 N/A N/A
ENSMUST00000182104 N/A N/A N/A 5.951±0.00 N/A 0.101±0.00 0.340±0.00 0.056±0.01 0.014±0.00 N/A 0.062±0.00 0.856±0.59 0.024±0.00 N/A
ENSMUST00000182446 0.061±0.03 N/A 0.090±0.00 N/A 0.086±0.01 0.074±0.00 0.536±0.24 0.045±0.02 0.047±0.03 N/A N/A 1.151±0.50 0.033±0.01 59.940±43.78
ENSMUST00000182932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000091419 ENSMUST00000164671 0.213±0.11 0.206±0.01 0.139±0.10 0.143±0.00 1.168±0.71 0.236±0.00 0.495±0.00 0.210±0.06 0.024±0.00 0.195±0.06 N/A 0.560±0.06 0.027±0.01 N/A
ENSMUSG00000097182 ENSMUST00000181054 0.071±0.02 0.070±0.03 0.020±0.00 0.042±0.03 0.084±0.02 0.040±0.01 0.011±0.00 0.033±0.01 0.013±0.01 0.018±0.00 0.019±0.01 0.079±0.06 0.007±0.00 0.041±0.03
ENSMUSG00000099340 ENSMUST00000188207 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A

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