C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), kappa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022172 Polk-201 ENSMUSG00000021668 10090 - 13:96480689-96542485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022172
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022172 1.031±0.28 1.749±0.47 4.842±0.10 1.011±0.47 0.684±0.34 0.726±0.13 0.356±0.15 0.630±0.32 1.473±1.01 1.591±0.64 1.167±0.46 1.707±1.16 3.489±0.31 3.635±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003684 IEA damaged DNA binding
GO:0003887 TAS DNA-directed DNA polymerase activity
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006281 IMP DNA repair
GO:0006297 IEA nucleotide-excision repair, DNA gap filling
GO:0046872 IEA metal ion binding
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241436 POLK-001 protein_coding Homo_sapiens 0 1978
ENST00000245448 ATP5S-002 protein_coding Homo_sapiens 0.00000001 66
ENST00000311459 ATP5S-003 protein_coding Homo_sapiens 0.00000009 66
ENST00000503479 POLK-013 nonsense_mediated_decay Homo_sapiens 0 1410
ENST00000504026 POLK-007 protein_coding Homo_sapiens 0 1528
ENST00000505774 POLK-014 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000505975 POLK-010 nonsense_mediated_decay Homo_sapiens 0 1683
ENST00000506928 POLK-003 processed_transcript Homo_sapiens 0 1099
ENST00000507073 POLK-015 processed_transcript Homo_sapiens 0 553
ENST00000508526 POLK-011 protein_coding Homo_sapiens 0 1098
ENST00000508867 POLK-005 retained_intron Homo_sapiens 0 1099
ENST00000509126 POLK-012 nonsense_mediated_decay Homo_sapiens 0 1528
ENST00000510815 POLK-009 nonsense_mediated_decay Homo_sapiens 0 1234
ENST00000511527 POLK-008 nonsense_mediated_decay Homo_sapiens 0 1236
ENST00000514141 POLK-006 nonsense_mediated_decay Homo_sapiens 0 1456
ENST00000514296 POLK-002 protein_coding Homo_sapiens 0 628
ENST00000515295 POLK-004 protein_coding Homo_sapiens 0 1530
ENST00000554204 ATP5S-001 nonsense_mediated_decay Homo_sapiens 0.00000001 66
ENST00000554438 ATP5S-010 processed_transcript Homo_sapiens 0.00000002 66

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