C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022460 Galnt15-001 ENSMUSG00000021903 10090 + 14:32028989-32062197 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022460
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022460 14.355±5.90 2.562±1.02 7.951±1.55 0.198±0.16 9.786±2.17 1.791±0.44 4.412±0.16 0.921±0.39 0.114±0.10 5.081±1.48 1.956±0.42 13.739±4.60 0.169±0.07 0.137±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A7 CIL_0005A7_0002 CGP 14:31700015-32062197
CIL_0004HN CIL_0004HN_0002 CGP 14:32028989-32085692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030133 IEA transport vesicle
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339732 GALNT15-001 protein_coding Homo_sapiens 0 1740
ENST00000430410 GALNT15-004 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000437509 GALNT15-002 protein_coding Homo_sapiens 0 1631
ENST00000489467 GALNT15-005 retained_intron Homo_sapiens 0 333
ENST00000617544 GALNT15-201 protein_coding Homo_sapiens 0 1735

Loading