C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022545 Fgf9-001 ENSMUSG00000021974 10090 + 14:58072686-58110174 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022545
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022545 0.510±0.11 2.086±0.53 2.118±0.61 0.123±0.08 0.779±0.26 0.952±0.12 1.647±0.79 0.090±0.03 0.160±0.08 0.196±0.12 0.210±0.11 0.234±0.09 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MD CIL_0004MD_0002 CGP 14:57916280-58112337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001525 IDA angiogenesis
GO:0001649 IMP osteoblast differentiation
GO:0002053 IDA positive regulation of mesenchymal cell proliferation
GO:0002062 IGI chondrocyte differentiation
GO:0003214 TAS cardiac left ventricle morphogenesis
GO:0003231 TAS cardiac ventricle development
GO:0005104 IEA fibroblast growth factor receptor binding
GO:0005604 IEA basement membrane
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0006606 IMP protein import into nucleus
GO:0007267 IMP cell-cell signaling
GO:0008201 IEA heparin binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0008584 IMP male gonad development
GO:0010628 IDA positive regulation of gene expression
GO:0021762 IEA substantia nigra development
GO:0030178 IGI negative regulation of Wnt signaling pathway
GO:0030238 IGI male sex determination
GO:0030324 IMP lung development
GO:0030326 IMP embryonic limb morphogenesis
GO:0030949 IMP positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0042472 IMP inner ear morphogenesis
GO:0043410 IEA positive regulation of MAPK cascade
GO:0045880 IDA positive regulation of smoothened signaling pathway
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0048505 IMP regulation of timing of cell differentiation
GO:0048566 IMP embryonic digestive tract development
GO:0048706 IMP embryonic skeletal system development
GO:0050679 IDA positive regulation of epithelial cell proliferation
GO:0051781 IEA positive regulation of cell division
GO:0060045 IGI positive regulation of cardiac muscle cell proliferation
GO:0060484 IMP lung-associated mesenchyme development
GO:0060979 TAS vasculogenesis involved in coronary vascular morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382353 FGF9-001 protein_coding Homo_sapiens 0 1655
ENST00000461657 FGF9-002 processed_transcript Homo_sapiens 0 285
ENST00000478546 FGF9-003 processed_transcript Homo_sapiens 0 595

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